Systematics of the avian family Alaudidae using multilocus and genomic data ... : النظاميات من عائلة الطيور Alaudidae باستخدام multilocus والبيانات الجينية ...

SNP datasets (gzipped VCF files) and tree output (newick-formatted trees in .trees files) associated with the publication Systematics of the avian family Alaudidae using multilocus and genomic data by Alström et al. (2023). In the VCF files, samples have intermediary sequence names. Below is a key (...

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Bibliographic Details
Main Authors: Per Alström, Zeinolabedin Mohammadi, Erik D. Enbody, Martin Irestedt, Derek Engelbrecht, Pierre‐André Crochet, Alban Guillaumet, Loïs Rancilhac, B. Irene Tieleman, Urban Olsson, Paul F. Donald, Martin Stervander
Format: Text
Language:English
Published: OpenAlex 2023
Subjects:
Avian Ecology and Climate Change Impacts
Ecology
FOS Biological sciences
Environmental Science
Physical Sciences
Population Genetic Structure and Dynamics
Genetics
Biochemistry, Genetics and Molecular Biology
Life Sciences
Systematics
Biology
Evolutionary biology
Zoology
Taxonomy biology
Alauda arvensis
Online Access:https://dx.doi.org/10.60692/yvje5-69682
https://gresis.osc.int//doi/10.60692/yvje5-69682
Description
Summary:SNP datasets (gzipped VCF files) and tree output (newick-formatted trees in .trees files) associated with the publication Systematics of the avian family Alaudidae using multilocus and genomic data by Alström et al. (2023). In the VCF files, samples have intermediary sequence names. Below is a key (sorted per name in VCF file) to taxon and ID. Further information can be found in Dataset SM1 in the original publication. VCF_name Taxon ID A_hamertoni_hamertoni_1982_3_71 Alaemon hamertoni hamertoni NHMUK 1982.3.71 A_hamertoni_tertia_1982_3_12 Alaemon hamertoni tertia NHMUK 1982.3.12 A_phoenicura_1949_25_4559 Ammomanes phoenicura NHMUK 1949.25.4559 Ala_alaudipes Alaemon alaudipes alaudipes DZUG U5653 Alauda_arvensis_KZ Alauda arvensis dulcivox DZUG U0587 Alaudala_seebohmi Alaudala cheleensis seebohmi DZUG U5316 AmmocincU4892_S121 Ammomanes cinctura DZUG U4892 AmmodesU5745_S28 Ammomanes deserti DZUG U5745 AmmodesU5748_S106 Galerida cristata magna DZUG U5748 C_duponti_margaritae_1952_51_107 Chersophilus duponti ... : مجموعات بيانات SNP (ملفات VCF مضغوطة) وإخراج الشجرة (أشجار بتنسيق newick في ملفات .trees) المرتبطة بنشر Systematics لعائلة الطيور Alaudidae باستخدام multilocus والبيانات الجينية بواسطة Alström et al. (2023). في ملفات VCF، يكون للعينات أسماء تسلسل وسيطة. يوجد أدناه مفتاح (تم فرزه حسب الاسم في ملف VCF) للتصنيف والمعرف. يمكن العثور على مزيد من المعلومات في مجموعة البيانات SM1 في المنشور الأصلي. VCF_NAME Taxon ID A_HAMERTONI_HAMERTONI _1982 _3 _71 Alaemon Hamertoni hamertoni NHMUK 1982.3.71 A_HAMERTONI_TERTIA _1982 _3 _12 Alaemon Hamertoni tertia NHMUK 1982.3.12 A_PHOENICURA _1949 _25 _4559 Ammomanes phoenicura NHMUK 1949.25.4559 Ala_alaudipes Alaudipes Alaudipes DZUG U5653 Alauda_arvensis_KZ Alauda arvensis dulcivox DZUG U0587 Alaudala_seebohmi Alaudala cheleensis seebohmi DZUG U5316 AmmocincU4892_S121 Ammomanes cinctura DZUG 4892 AmmU 5745_Ammomanes Desert DGU5745 Amm57106_SGalida Magistna DZUna_UG _548_CHMU _1952 107 Chersophilus duponti margaritae NHMUK 1952.51.107 Cal_brachydactyla Calandrella brachydactyla ...

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