Metabarcoding dataset of surface microbial eukaryotes in the Western Arctic Ocean (Canada Basin/Beaufort Sea) ...

Fasta file of amplicon sequence variant (ASV) sequences, ASV phylogeny in Newick format, ASV table of relative abundance in samples and table of taxonomic information associated with each ASV. Raw sequence data were processed using DADA2 v1.14 and taxonomic assignment of ASV sequences was done using...

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Bibliographic Details
Main Authors: Jackson, Victoria L N, Grevesse, Thomas, Kilias, Estelle S, Onda, Deo F L, Thompson, Kirsten F, Allen, Michael J, Walsh, David A, Lovejoy, Connie, Monier, Adam
Format: Dataset
Language:English
Published: zenodo 2023
Subjects:
Arctic
Arctic Ocean
Beaufort Sea
canada basin
Online Access:https://dx.doi.org/10.5281/zenodo.7612768
https://zenodo.org/doi/10.5281/zenodo.7612768
Description
Summary:Fasta file of amplicon sequence variant (ASV) sequences, ASV phylogeny in Newick format, ASV table of relative abundance in samples and table of taxonomic information associated with each ASV. Raw sequence data were processed using DADA2 v1.14 and taxonomic assignment of ASV sequences was done using the PR2 database v4.12.0. The table of standardised environmental metadata (z-scores) is also provided. Additionally, the OTU (98%) table of relative abundances in samples and phylogeny in Newick format is available. ...

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