Environmentontology/Envo: Protected Planet

• Main Authors: Buttigieg, Pier Luigi, Mungall, Chris, SUZUKI, Shinya, Marie-Angélique Laporte, , Renzo, Blumberg, Kai, Uberon
• Format: Article in Journal/Newspaper
• Language: unknown
• Published: Zenodo 2018
• Subjects: Obo; Sea ice; Tundra
• Online Access: https://dx.doi.org/10.5281/zenodo.1442753; https://zenodo.org/record/1442753

Eponyms for this release IUCN protected landscape/seascape IUCN strict nature reserve IUCN protected area with sustainable use of natural resources Description This backdated release captures progress across several development threads. Major themes include: The expression of IUCN protected area classification for use in SDGIO and other resources handling socio-ecological protection Expression of more CMECs classes to enhance marine semantics Addition of terms to support GFBio data brokerage to PANGAEA and ENA/EBI Further development of environmental zone semantics, with waste disposal use cases Further refinement of process hierarchies for generalisabilityF Extension of atmospheric semantics across cloud and aerosol formation processes Initialisation of dust patterns linked to natural and anthropogenic sources Exploration of radiation semantics (processes, dispositions, material entities) Import of FOODON classes required by the envoMEO subse now linked to the MEO vocabulary in MicrobeDB.jp A large number of terms from other ontologies were imported to allow denser axiomatisation. However, many of these are likely to be pruned back in subsequent releases to improve stability. As shown in the commit log, we have also trimmed away imports which 1) are not heavily woven in to ENVO semantics and 2) are causing errors due to autophagic imports of stale ontologies. New Terms acidic soil acidic volcanic ash active ecosystem management process advective transport process aerosol formation event aerosol formation process agricultural process agronomic process algal material alluvial deposit alluvial sediment alluvium alpine tundra ecosystem aluminium dust anchor ice animal aquaculture process animal husbandry anthropised terrestrial environmental zone aquatic estuarine layer aquatic natural environment arable land arable or pasturable land arable area designated for human defecation area designated for waste storage area of developed space area of low atmospheric pressure area protected according to IUCN guidelines asphalt road atmospheric aerosol formation event atmospheric secondary aerosol formation process atmospheric wind direction atmospheric wind speed atmospheric zone barium dust Bondon cheese environment brackish water body brown sea ice brush fire bush area bush fire canopy cirrus cloud climate system cnidarian-associated environment coastal shrimp pond commercial building concrete road conservation-focused active ecosystem management process constructed pavement convective storm cosmic ray shielding disposition crater zone crop canopy cropland ecosystem crustacean farming process cyclone defence against flooding desert diurnal marine tidal flow process diurnal marine tidal flow zone driveway ecosystem decay ecosystem fragment ecosystem fragmentation process environment associated with an aquatic invertebrate environmental zone of processual equilibrium erosion estuarine coastal lower water column estuarine coastal pycnocline estuarine coastal surface layer estuarine coastal upper water column estuarine open water lower water column estuarine open water pycnocline estuarine open water surface layer estuarine open water upper water column estuarine tidal riverine coastal lower water column estuarine tidal riverine coastal pycnocline estuarine tidal riverine coastal surface layer estuarine tidal riverine coastal upper water column estuarine tidal riverine open water lower water column estuarine tidal riverine open water pycnocline estuarine tidal riverine open water surface layer estuarine tidal riverine open water upper water column extra-tropical cyclone finfish farming process floating ice mass forest canopy forest ecosystem fresh water body freshwater macrophyte farming process freshwater seep riverine anchor ice gamma-ray stellar radiation geodiversity glacial equlibrium line glacial ice accumulation zone grassland ecosystem habitat fragmentation process Hill sphere holothurian digestive tract contents holothurian digestive tract humic kerogen hydroclimate ice accumulation zone ice decumulation zone impermeable surface layer induced magnetosphere industrial fire infrared stellar radiation intrinsic magnetosphere ionising stellar radiation IUCN habitat/species management area IUCN natural monument or feature IUCN protected area with sustainable use of natural resources IUCN protected landscape/seascape IUCN strict nature reserve IUCN wilderness area kaolin dust kerogen labile kerogen Lagrangian point land fire liquid air-water interface layer liquid layer liquid surface layer lithification lumber production process magnetosphere marine environmental zone marine tidal flow process marine tidal flow zone marine tidal flow material accumulation zone material decumulation zone material isosurface microwave stellar radiation mollusc farming process newCloud newCloud nitrogen cycling office building office Paramo pasturable land pasture fire paved parking lot phosphorous cycling planktonic kerogen plant aquaculture process primary aerosol formation process radiation shielding disposition radio wave stellar radiation ranch recalcitrant kerogen residual kerogen rhizoplane riverine anchor ice rural stormwater sacred site saline shrimp pond water saline water body sapropelic kerogen seaweed farming process secondary aerosol formation process sediment surface semi-diurnal marine tidal flow process semi-diurnal marine tidal flow zone sidewalk silica dust slate dust solid layer solid surface layer stellar radiation stormwater sulfrous kerogen sulfur cycling swamp area talc dust tended pasturable land terrestrial environmental zone terrestrial natural environment thermal pollution of an aquatic system thermal pollution tidal flow process tidal mangrove shrubland transport of child feces to a designated site transport of household waste to a designated storage site transport of waste to a designated storage site tropical marginal sea biome tropical storm tundra ecosystem ultraviolet stellar radiation urban stormwater visible spectrum stellar radiation vog volcanic crater glacier volcanic crater zone volume of hydrological precipitation warm core cyclone waste disposal process water accumulation process water ice layer water surface water-based planetary surface wetland ecosystem woodland canopy woodland ecosystem x-ray stellar radiation New imported classes PURL label http://purl.obolibrary.org/obo/AGRO_00000002 tillage process http://purl.obolibrary.org/obo/CHEBI_140503 kaolin http://purl.obolibrary.org/obo/CHEBI_9171 skatole http://purl.obolibrary.org/obo/CHEBI_58454 kynurenate http://purl.obolibrary.org/obo/CHEBI_53388 poly(hydroxybutyrate) http://purl.obolibrary.org/obo/CHEBI_47032 1,4-dioxane http://purl.obolibrary.org/obo/CHEBI_39285 chloropicrin http://purl.obolibrary.org/obo/CHEBI_35404 chromate http://purl.obolibrary.org/obo/CHEBI_33666 polycyclic hydrocarbon