Supplementary Material for Doctoral Thesis: Ecology and genomic diversity of iron-oxidizing bacteria at Arctic deep-sea hydrothermal vents: Lessons from genome-resolved metagenomics and microscopy ...
This repository contains supplementary material related to the doctoral thesis “Ecology and genomic diversity of iron-oxidizing bacteria at Arctic deep-sea hydrothermal vents: Lessons from genome-resolved metagenomics and microscopy”. Doctoral Thesis for philosophiae doctor (Phd) at University of Be...
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| Format: | Dataset |
| Language: | unknown |
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Zenodo
2024
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| Online Access: | https://dx.doi.org/10.5281/zenodo.10656789 https://zenodo.org/doi/10.5281/zenodo.10656789 |
| Summary: | This repository contains supplementary material related to the doctoral thesis “Ecology and genomic diversity of iron-oxidizing bacteria at Arctic deep-sea hydrothermal vents: Lessons from genome-resolved metagenomics and microscopy”. Doctoral Thesis for philosophiae doctor (Phd) at University of Bergen. 2024. 1) FigureS1.pdf Figure S1. Phylogeny of Zetaproteobacteria from Aurora vent field. The tree is based on a concatenated alignment of a manually curated set of 12 single copy gene markers (Hribovšek et al., 2023) using MAGs from this study and references. Blue genomes have been reconstructed from the Aurora vent field. The maximum likelihood tree with substitution model LG+F+R9. Black node circles mark branches with support values higher than 80% with SH-like approximate likelihood ratio test and 95% with ultrafast bootstrapping, both including 1000 iterations. 2) FigureS2.pdf Figure S2. Phylogeny of the large subunit of uptake NiFe hydrogenase (hya; 1d). Phylogenetic tree of the large subunit of uptake ... |
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