Shrew (Sorex sp.) Gut Contents Identified by DNA Metabarcoding, North America, 1968-2016 ...

This data package contains four tables related to helminths and bacteria identified in the guts of North American shrews (Genus: Sorex). Tables include: two tables of specimen information about each shrew, such as species, museum collection identification, and NCBI accession IDs; one table of NBCI G...

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Bibliographic Details
Main Authors: S.E. Greiman, Barbara J Pierson, Damian M Menning, Sarah A Sonsthagen, Sandra L Talbot
Format: Dataset
Language:unknown
Published: U.S. Geological Survey 2020
Subjects:
Animals/Vertebrates
Mammals
Genetics
FOS Biological sciences
Alaska
Biodiversity
Canada
Flatworms/Flukes/Tapeworms
Horsehair Worms
Roundworms
Bacteria/Archaea
Ecological Dynamics
Community Dynamics
Community Structure
Endoparasites
Hosts
Ecological Distribution
DNA Sequencing
Parasites
Bacteriology
Platyhelminths
Shrews
Cestoda
Helminths
Nematoda
DNA Barcoding
Taxonomic
RNA
Ribosomal
16S
Gastrointestinal Microbiome
Colorado
New Mexico
Northwest Territories
Yukon Territory
Yukon
Online Access:https://dx.doi.org/10.5066/p9yh4c20
https://www.sciencebase.gov/catalog/item/61a584bed34eb622f6974d35
Description
Summary:This data package contains four tables related to helminths and bacteria identified in the guts of North American shrews (Genus: Sorex). Tables include: two tables of specimen information about each shrew, such as species, museum collection identification, and NCBI accession IDs; one table of NBCI GenBank accession numbers of previously identified DNA sequences used in this study to design the helminth markers and serve as a reference library for the sequences obtained; and one table of taxonomic details of gut bacteria identified in this study. ...

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