Data from: Shifts of tundra bacterial and archaeal communities along a permafrost thaw gradient in Alaska ...
Understanding the response of permafrost microbial communities to climate warming is crucial for evaluating ecosystem feedbacks to global change. This study investigated soil bacterial and archaeal communities by Illumina MiSeq sequencing of 16S rRNA gene amplicons across a permafrost thaw gradient...
Main Authors: | , , , , , , , , , , , , , |
---|---|
Format: | Dataset |
Language: | English |
Published: |
Dryad
2014
|
Subjects: | |
Online Access: | https://dx.doi.org/10.5061/dryad.p1602 https://datadryad.org/stash/dataset/doi:10.5061/dryad.p1602 |
id |
ftdatacite:10.5061/dryad.p1602 |
---|---|
record_format |
openpolar |
spelling |
ftdatacite:10.5061/dryad.p1602 2024-06-09T07:48:58+00:00 Data from: Shifts of tundra bacterial and archaeal communities along a permafrost thaw gradient in Alaska ... Deng, Jie Gu, Yunfu Zhang, Jin Xue, Kai Qin, Yujia Yuan, Mengting Yin, Huaqun He, Zhili Wu, Liyou Schuur, Edward Tiedje, James Zhou, Jizhong Tiedje, James M. Schuur, Edward A. G. 2014 https://dx.doi.org/10.5061/dryad.p1602 https://datadryad.org/stash/dataset/doi:10.5061/dryad.p1602 en eng Dryad https://dx.doi.org/10.1111/mec.13015 Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode cc0-1.0 Bioinfomatics/Phyloinfomatics Dataset dataset 2014 ftdatacite https://doi.org/10.5061/dryad.p160210.1111/mec.13015 2024-05-13T11:06:08Z Understanding the response of permafrost microbial communities to climate warming is crucial for evaluating ecosystem feedbacks to global change. This study investigated soil bacterial and archaeal communities by Illumina MiSeq sequencing of 16S rRNA gene amplicons across a permafrost thaw gradient at different depths in Alaska with thaw progression for over three decades. Over 4.6 million passing 16S rRNA gene sequences were obtained from a total of 97 samples, corresponding to 61 known classes and 470 genera. Soil depth and the associated soil physical-chemical properties had predominant impacts on the diversity and composition of the microbial communities. Both richness and evenness of the microbial communities decreased with soil depth. Acidobacteria, Verrucomicrobia, Alpha- and Gamma-Proteobacteria dominated the microbial communities in the upper horizon, whereas abundances of Bacteroidetes, Delta-Proteobacteria and Firmicutes increased toward deeper soils. Effects of thaw progression were absent in ... : soil_metadataUclust_representative_sequencesOTU_table_classified_by_RDP.txt ... Dataset permafrost Tundra Alaska DataCite Metadata Store (German National Library of Science and Technology) |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
Bioinfomatics/Phyloinfomatics |
spellingShingle |
Bioinfomatics/Phyloinfomatics Deng, Jie Gu, Yunfu Zhang, Jin Xue, Kai Qin, Yujia Yuan, Mengting Yin, Huaqun He, Zhili Wu, Liyou Schuur, Edward Tiedje, James Zhou, Jizhong Tiedje, James M. Schuur, Edward A. G. Data from: Shifts of tundra bacterial and archaeal communities along a permafrost thaw gradient in Alaska ... |
topic_facet |
Bioinfomatics/Phyloinfomatics |
description |
Understanding the response of permafrost microbial communities to climate warming is crucial for evaluating ecosystem feedbacks to global change. This study investigated soil bacterial and archaeal communities by Illumina MiSeq sequencing of 16S rRNA gene amplicons across a permafrost thaw gradient at different depths in Alaska with thaw progression for over three decades. Over 4.6 million passing 16S rRNA gene sequences were obtained from a total of 97 samples, corresponding to 61 known classes and 470 genera. Soil depth and the associated soil physical-chemical properties had predominant impacts on the diversity and composition of the microbial communities. Both richness and evenness of the microbial communities decreased with soil depth. Acidobacteria, Verrucomicrobia, Alpha- and Gamma-Proteobacteria dominated the microbial communities in the upper horizon, whereas abundances of Bacteroidetes, Delta-Proteobacteria and Firmicutes increased toward deeper soils. Effects of thaw progression were absent in ... : soil_metadataUclust_representative_sequencesOTU_table_classified_by_RDP.txt ... |
format |
Dataset |
author |
Deng, Jie Gu, Yunfu Zhang, Jin Xue, Kai Qin, Yujia Yuan, Mengting Yin, Huaqun He, Zhili Wu, Liyou Schuur, Edward Tiedje, James Zhou, Jizhong Tiedje, James M. Schuur, Edward A. G. |
author_facet |
Deng, Jie Gu, Yunfu Zhang, Jin Xue, Kai Qin, Yujia Yuan, Mengting Yin, Huaqun He, Zhili Wu, Liyou Schuur, Edward Tiedje, James Zhou, Jizhong Tiedje, James M. Schuur, Edward A. G. |
author_sort |
Deng, Jie |
title |
Data from: Shifts of tundra bacterial and archaeal communities along a permafrost thaw gradient in Alaska ... |
title_short |
Data from: Shifts of tundra bacterial and archaeal communities along a permafrost thaw gradient in Alaska ... |
title_full |
Data from: Shifts of tundra bacterial and archaeal communities along a permafrost thaw gradient in Alaska ... |
title_fullStr |
Data from: Shifts of tundra bacterial and archaeal communities along a permafrost thaw gradient in Alaska ... |
title_full_unstemmed |
Data from: Shifts of tundra bacterial and archaeal communities along a permafrost thaw gradient in Alaska ... |
title_sort |
data from: shifts of tundra bacterial and archaeal communities along a permafrost thaw gradient in alaska ... |
publisher |
Dryad |
publishDate |
2014 |
url |
https://dx.doi.org/10.5061/dryad.p1602 https://datadryad.org/stash/dataset/doi:10.5061/dryad.p1602 |
genre |
permafrost Tundra Alaska |
genre_facet |
permafrost Tundra Alaska |
op_relation |
https://dx.doi.org/10.1111/mec.13015 |
op_rights |
Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode cc0-1.0 |
op_doi |
https://doi.org/10.5061/dryad.p160210.1111/mec.13015 |
_version_ |
1801381006854324224 |