Data from: Shifts of tundra bacterial and archaeal communities along a permafrost thaw gradient in Alaska ...

Understanding the response of permafrost microbial communities to climate warming is crucial for evaluating ecosystem feedbacks to global change. This study investigated soil bacterial and archaeal communities by Illumina MiSeq sequencing of 16S rRNA gene amplicons across a permafrost thaw gradient...

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Bibliographic Details
Main Authors: Deng, Jie, Gu, Yunfu, Zhang, Jin, Xue, Kai, Qin, Yujia, Yuan, Mengting, Yin, Huaqun, He, Zhili, Wu, Liyou, Schuur, Edward, Tiedje, James, Zhou, Jizhong, Tiedje, James M., Schuur, Edward A. G.
Format: Dataset
Language:English
Published: Dryad 2014
Subjects:
Bioinfomatics/Phyloinfomatics
permafrost
Tundra
Alaska
Online Access:https://dx.doi.org/10.5061/dryad.p1602
https://datadryad.org/stash/dataset/doi:10.5061/dryad.p1602
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Summary:Understanding the response of permafrost microbial communities to climate warming is crucial for evaluating ecosystem feedbacks to global change. This study investigated soil bacterial and archaeal communities by Illumina MiSeq sequencing of 16S rRNA gene amplicons across a permafrost thaw gradient at different depths in Alaska with thaw progression for over three decades. Over 4.6 million passing 16S rRNA gene sequences were obtained from a total of 97 samples, corresponding to 61 known classes and 470 genera. Soil depth and the associated soil physical-chemical properties had predominant impacts on the diversity and composition of the microbial communities. Both richness and evenness of the microbial communities decreased with soil depth. Acidobacteria, Verrucomicrobia, Alpha- and Gamma-Proteobacteria dominated the microbial communities in the upper horizon, whereas abundances of Bacteroidetes, Delta-Proteobacteria and Firmicutes increased toward deeper soils. Effects of thaw progression were absent in ... : soil_metadataUclust_representative_sequencesOTU_table_classified_by_RDP.txt ...

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