Alignment of 133bp minibarcode COI reference sequences from Barcode of Life Database and corresponding to 33 bat species found in France
This FASTA file contains 444 reference sequences available in BOLD for the 33 bat species found in France. We removed sequences showing less than 132bp for the COI minibarcode used in our study and/or showing one or more ambiguous base (N). Note that the sequences GBMA9839-15, ABBWP228-07, NOMAM103-...
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Online Access: | https://dx.doi.org/10.5061/dryad.kv02g/12 http://datadryad.org/resource/doi:10.5061/dryad.kv02g/12 |
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ftdatacite:10.5061/dryad.kv02g/12 2023-05-15T15:37:49+02:00 Alignment of 133bp minibarcode COI reference sequences from Barcode of Life Database and corresponding to 33 bat species found in France Galan, Maxime Pons, Jean-Baptiste Tournayre, Orianne Pierre, Eric Leuchtmann, Maxime Pontier, Dominique Charbonnel, Nathalie 2017 https://dx.doi.org/10.5061/dryad.kv02g/12 http://datadryad.org/resource/doi:10.5061/dryad.kv02g/12 unknown Dryad Digital Repository https://dx.doi.org/10.5061/dryad.kv02g http://creativecommons.org/publicdomain/zero/1.0 CC0 environmental DNA eDNA high-throughput sequencing HTS false positives predator-prey interactions Western France Poitou-Charentes Arthropoda Chiroptera Barbastella barbastellus Eptesicus serotinus Miniopterus schreibersii Myotis alcathoe Myotis bechsteinii Myotis daubentonii Myotis emarginatus Myotis myotis Myotis mystacinus Myotis nattereri Pipistrellus kuhlii Pipistrellus pipistrellus Plecotus auritus Rhinolophus euryale Rhinolophus ferrumequinum Rhinolophus hipposideros dataset Dataset DataFile 2017 ftdatacite https://doi.org/10.5061/dryad.kv02g/12 https://doi.org/10.5061/dryad.kv02g 2021-11-05T12:55:41Z This FASTA file contains 444 reference sequences available in BOLD for the 33 bat species found in France. We removed sequences showing less than 132bp for the COI minibarcode used in our study and/or showing one or more ambiguous base (N). Note that the sequences GBMA9839-15, ABBWP228-07, NOMAM103-16, NOMAM142-16 and SKBPA621-11 might not be reliable: they could have been assigned to the wrong species or may be of low quality (see results in the phylogenetic tree and Table S4, Supplemental Information). Dataset Barbastella barbastellus Myotis nattereri Pipistrellus pipistrellus DataCite Metadata Store (German National Library of Science and Technology) |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
unknown |
topic |
environmental DNA eDNA high-throughput sequencing HTS false positives predator-prey interactions Western France Poitou-Charentes Arthropoda Chiroptera Barbastella barbastellus Eptesicus serotinus Miniopterus schreibersii Myotis alcathoe Myotis bechsteinii Myotis daubentonii Myotis emarginatus Myotis myotis Myotis mystacinus Myotis nattereri Pipistrellus kuhlii Pipistrellus pipistrellus Plecotus auritus Rhinolophus euryale Rhinolophus ferrumequinum Rhinolophus hipposideros |
spellingShingle |
environmental DNA eDNA high-throughput sequencing HTS false positives predator-prey interactions Western France Poitou-Charentes Arthropoda Chiroptera Barbastella barbastellus Eptesicus serotinus Miniopterus schreibersii Myotis alcathoe Myotis bechsteinii Myotis daubentonii Myotis emarginatus Myotis myotis Myotis mystacinus Myotis nattereri Pipistrellus kuhlii Pipistrellus pipistrellus Plecotus auritus Rhinolophus euryale Rhinolophus ferrumequinum Rhinolophus hipposideros Galan, Maxime Pons, Jean-Baptiste Tournayre, Orianne Pierre, Eric Leuchtmann, Maxime Pontier, Dominique Charbonnel, Nathalie Alignment of 133bp minibarcode COI reference sequences from Barcode of Life Database and corresponding to 33 bat species found in France |
topic_facet |
environmental DNA eDNA high-throughput sequencing HTS false positives predator-prey interactions Western France Poitou-Charentes Arthropoda Chiroptera Barbastella barbastellus Eptesicus serotinus Miniopterus schreibersii Myotis alcathoe Myotis bechsteinii Myotis daubentonii Myotis emarginatus Myotis myotis Myotis mystacinus Myotis nattereri Pipistrellus kuhlii Pipistrellus pipistrellus Plecotus auritus Rhinolophus euryale Rhinolophus ferrumequinum Rhinolophus hipposideros |
description |
This FASTA file contains 444 reference sequences available in BOLD for the 33 bat species found in France. We removed sequences showing less than 132bp for the COI minibarcode used in our study and/or showing one or more ambiguous base (N). Note that the sequences GBMA9839-15, ABBWP228-07, NOMAM103-16, NOMAM142-16 and SKBPA621-11 might not be reliable: they could have been assigned to the wrong species or may be of low quality (see results in the phylogenetic tree and Table S4, Supplemental Information). |
format |
Dataset |
author |
Galan, Maxime Pons, Jean-Baptiste Tournayre, Orianne Pierre, Eric Leuchtmann, Maxime Pontier, Dominique Charbonnel, Nathalie |
author_facet |
Galan, Maxime Pons, Jean-Baptiste Tournayre, Orianne Pierre, Eric Leuchtmann, Maxime Pontier, Dominique Charbonnel, Nathalie |
author_sort |
Galan, Maxime |
title |
Alignment of 133bp minibarcode COI reference sequences from Barcode of Life Database and corresponding to 33 bat species found in France |
title_short |
Alignment of 133bp minibarcode COI reference sequences from Barcode of Life Database and corresponding to 33 bat species found in France |
title_full |
Alignment of 133bp minibarcode COI reference sequences from Barcode of Life Database and corresponding to 33 bat species found in France |
title_fullStr |
Alignment of 133bp minibarcode COI reference sequences from Barcode of Life Database and corresponding to 33 bat species found in France |
title_full_unstemmed |
Alignment of 133bp minibarcode COI reference sequences from Barcode of Life Database and corresponding to 33 bat species found in France |
title_sort |
alignment of 133bp minibarcode coi reference sequences from barcode of life database and corresponding to 33 bat species found in france |
publisher |
Dryad Digital Repository |
publishDate |
2017 |
url |
https://dx.doi.org/10.5061/dryad.kv02g/12 http://datadryad.org/resource/doi:10.5061/dryad.kv02g/12 |
genre |
Barbastella barbastellus Myotis nattereri Pipistrellus pipistrellus |
genre_facet |
Barbastella barbastellus Myotis nattereri Pipistrellus pipistrellus |
op_relation |
https://dx.doi.org/10.5061/dryad.kv02g |
op_rights |
http://creativecommons.org/publicdomain/zero/1.0 |
op_rightsnorm |
CC0 |
op_doi |
https://doi.org/10.5061/dryad.kv02g/12 https://doi.org/10.5061/dryad.kv02g |
_version_ |
1766368489564536832 |