Gray seal SNPs

Catalog of single nucleotide polymorphisms (SNPs) identified in ddRAD loci among 252 gray seals from the Northwest Atlantic. SNPs were identified and genotyped using a bounded maximum-likelihood model in Stacks v1.21 with no minimum minor allele frequency. LocusID refers to the locus ID in RAD loci...

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Bibliographic Details
Main Author: Cammen, Kristina
Format: Dataset
Language:unknown
Published: Dryad Digital Repository 2018
Subjects:
gray seal
restriction site-associated DNA sequencing
Northwest Atlantic
Halichoerus grypus atlantica
Online Access:https://dx.doi.org/10.5061/dryad.fg52075/3
https://datadryad.org/resource/doi:10.5061/dryad.fg52075/3
Description
Summary:Catalog of single nucleotide polymorphisms (SNPs) identified in ddRAD loci among 252 gray seals from the Northwest Atlantic. SNPs were identified and genotyped using a bounded maximum-likelihood model in Stacks v1.21 with no minimum minor allele frequency. LocusID refers to the locus ID in RAD loci catalog FASTA file; Column refers to the position of the variable nucleotide within the locus.

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