PPC_correction.tar.gz

This archive (700MB) contains the following data files for Pritchard et al. (2016), used for calculating and applying the PPC correction: R_code for_PPC_correction.txt: Annotated R code for calculating PPC correction coefficients from data in CALL.txt and INT.txt. CALL.txt: File of genotype calls. I...

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Bibliographic Details
Main Authors: Pritchard, Victoria L., Erkinaro, Jaakko, Kent, Matthew P., Niemelä, Eero, Orell, Panu, Lien, Sigbjørn, Primmer, Craig R.
Format: Dataset
Language:unknown
Published: Dryad Digital Repository 2016
Subjects:
Atlantic salmon
aquaculture escapee
introgressive hybridization
SNP array
allelotyping
North Atlantic
Holocene
Salmo salar
Online Access:https://dx.doi.org/10.5061/dryad.dg8f3/6
http://datadryad.org/resource/doi:10.5061/dryad.dg8f3/6
Description
Summary:This archive (700MB) contains the following data files for Pritchard et al. (2016), used for calculating and applying the PPC correction: R_code for_PPC_correction.txt: Annotated R code for calculating PPC correction coefficients from data in CALL.txt and INT.txt. CALL.txt: File of genotype calls. INT2.txt: File of A and B allele probe intensities. PPC_correction_coefficients.csv: PPC correction coefficients returned for each SNP. See README file in archive for further information.

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