genome assembly_kmer70_min10000_scaffolds_revisedassembly

The golden eagle genome was assembled in ABySS with the following parameters: abyss-pe s=202 n=10 k=70 l=30; followed by file specifications for 1) 'lib' -- the paired-end and mate-pair reads, 2) 'se' -- the unpaired and mate-pair reads used as single-end reads in assembly and 3)...

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Bibliographic Details
Main Authors: Katzner, Todd E., Bloom, Peter H., Ji, Yanzhu, Wijayawardena, Bhagya K., DeWoody, J. Andrew
Format: Dataset
Language:unknown
Published: Dryad Digital Repository 2014
Subjects:
avian genome
eagle conservation
genetic markers
raptor
California
USA
Aquila chrysaetos
golden eagle
Online Access:https://dx.doi.org/10.5061/dryad.d0md6/14
http://datadryad.org/resource/doi:10.5061/dryad.d0md6/14
Description
Summary:The golden eagle genome was assembled in ABySS with the following parameters: abyss-pe s=202 n=10 k=70 l=30; followed by file specifications for 1) 'lib' -- the paired-end and mate-pair reads, 2) 'se' -- the unpaired and mate-pair reads used as single-end reads in assembly and 3) 'mp' -- the paired-end and mate-pair reads used in scaffolding.

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