Data from: Phylotranscriptomics resolves interspecific relationships and indicates multiple historical out-of-North America dispersals through the Bering Land Bridge for the genus Picea (Pinaceae) ...

A robust phylogeny is prerequisite to understand the evolution and biogeography of organisms. However, ancient and recent evolutionary radiations occurred in many plant lineages, which pose great challenges for phylogenetic analysis, especially for conifers characterized by large effective populatio...

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Bibliographic Details
Main Authors: Shao, Cheng-Cheng, Shen, Ting-Ting, Jin, Wei-Tao, Mao, Han-Jie, Ran, Jin-Hua, Wang, Xiao-Quan
Format: Dataset
Language:English
Published: Dryad 2019
Subjects:
Online Access:https://dx.doi.org/10.5061/dryad.595c22m
https://datadryad.org/stash/dataset/doi:10.5061/dryad.595c22m
Description
Summary:A robust phylogeny is prerequisite to understand the evolution and biogeography of organisms. However, ancient and recent evolutionary radiations occurred in many plant lineages, which pose great challenges for phylogenetic analysis, especially for conifers characterized by large effective population sizes and long generation times. Picea is an important component of the dark coniferous forests in the Northern Hemisphere. Previous studies improved our understanding of its evolutionary history, but its interspecific relationships and biogeographic history remain largely unresolved. In the present study, we reconstructed a well-resolved phylogeny of Picea by comparative transcriptomic analysis based on a complete species sampling. The phylogenetic analysis, together with molecular dating and ancestral area reconstruction, further supports the North American origin hypothesis for Picea, and indicates that this genus experienced multiple out-of-North America dispersals by the Bering Land Bridge. We also found ... : 1141_AA_datasetsAA_TreesAA_Tree.zipAA_concatenation.fas1141OG-AA-dataset-FcC_supermatrix.fas1141_CDS_datasetsCDS_treeCDS_Tree.zipCDS_concatenation_data.fas1141OG-CDSdataset-FcC_supermatrix.fas1141_CDS12_datasetsCDS12_treeCDS12_Tree.zipCDS12_concatenation.fas1141OG-CDS12dataset-FcC_supermatrix.fasMolecular Clock result1141-CDS12-30YI-CIPRES-beast-treeannotator.tre ...