Phylogenomic data reveal widespred introgression across the range of an alpine and arctic specialist ...

Understanding how gene flow affects population divergence and speciation remains challenging. Differentiating one evolutionary process from another can be difficult because multiple processes can produce similar patterns, and more than one process can occur simultaneously. While simple population mo...

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Bibliographic Details
Main Authors: Funk, Erik, Spellman, Garth, Winker, Kevin, Withrow, Jack, Zavaleta, Erika, Ruegg, Kristen, Taylor, Scott
Format: Dataset
Language:English
Published: Dryad 2019
Subjects:
Online Access:https://dx.doi.org/10.5061/dryad.31zcrjdg9
https://datadryad.org/stash/dataset/doi:10.5061/dryad.31zcrjdg9
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Summary:Understanding how gene flow affects population divergence and speciation remains challenging. Differentiating one evolutionary process from another can be difficult because multiple processes can produce similar patterns, and more than one process can occur simultaneously. While simple population models produce predictable results, how these processes balance in taxa with patchy distributions and complicated natural histories is less certain. These types of populations might be highly connected through migration (gene flow), but can experience stronger effects of genetic drift and inbreeding, or localized selection. While different signals can be difficult to separate, the application of high throughput sequence data can provide the resolution necessary to distinguish many of these processes. We present whole genome sequence data for an avian species group with an alpine and arctic tundra distribution to examine the role that different population genetic processes have played in their evolutionary history. ... : Shallow whole genome sequence data of 67 rosy-finch individuals across 4 species. VCF file includes quality filtered snps, but no other filters have been applied. See NCBI SRA BioProject PRJNA659436 for raw fastqs, and TreeBASE for alignments and tree files (http://purl.org/phylo/treebase/phylows/study/TB2:S26830). ...