Seawater carbonate chemistry and metabolic rate and nitrogenous waste handling in the early life stages of yellowfin tuna (Thunnus albacares) ...

Ocean acidification is predicted to have a wide range of impacts on fish, but there has been little focus on broad-ranging pelagic fish species. Early life stages of fish are thought to be particularly susceptible to CO2 exposure, since acid-base regulatory faculties may not be fully developed. We o...

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Main Authors: Heuer, Rachael M, Wang, Yadong, Pasparakis, Christina, Zhang, Wenlong, Scholey, Vernon, Margulies, Daniel, Grosell, Martin
Format: Dataset
Language:English
Published: PANGAEA 2023
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.957625
https://doi.pangaea.de/10.1594/PANGAEA.957625
id ftdatacite:10.1594/pangaea.957625
record_format openpolar
spelling ftdatacite:10.1594/pangaea.957625 2024-04-28T08:34:52+00:00 Seawater carbonate chemistry and metabolic rate and nitrogenous waste handling in the early life stages of yellowfin tuna (Thunnus albacares) ... Heuer, Rachael M Wang, Yadong Pasparakis, Christina Zhang, Wenlong Scholey, Vernon Margulies, Daniel Grosell, Martin 2023 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.957625 https://doi.pangaea.de/10.1594/PANGAEA.957625 en eng PANGAEA https://cran.r-project.org/web/packages/seacarb/index.html https://dx.doi.org/10.1016/j.cbpa.2023.111398 https://dx.doi.org/10.7266/7z48r4mc https://cran.r-project.org/web/packages/seacarb/index.html Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Animalia Chordata Containers and aquaria 20-1000 L or < 1 m**2 Laboratory experiment Laboratory strains Nekton Not applicable Other metabolic rates Pelagos Reproduction FOS Medical biotechnology Respiration Single species Thunnus albacares Type of study Species, unique identification Species, unique identification URI Species, unique identification Semantic URI Time in hours Treatment Replicate Ammonia per individual Urea per individual Total nitrogen per individual Ammonia excretion per individual Urea excretion rate per individual Total nitrogen excretion rate per individual Identification Oxygen consumption per individual Size Ratio Temperature, water Temperature, water, standard error Salinity Salinity, standard error Oxygen, dissolved Oxygen, dissolved, standard error pH pH, standard error Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard error Alkalinity, total Alkalinity, total, standard error Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion dataset Dataset 2023 ftdatacite https://doi.org/10.1594/pangaea.95762510.1016/j.cbpa.2023.11139810.7266/7z48r4mc 2024-04-02T11:36:31Z Ocean acidification is predicted to have a wide range of impacts on fish, but there has been little focus on broad-ranging pelagic fish species. Early life stages of fish are thought to be particularly susceptible to CO2 exposure, since acid-base regulatory faculties may not be fully developed. We obtained yellowfin tuna (Thunnus albacares) from a captive spawning broodstock population and exposed them to control or 1900 μatm CO2 through the first three days of development as embryos transitioned into yolk sac larvae. Metabolic rate, yolk sac depletion, and oil globule depletion were measured to assess overall energy usage. To determine if CO2 altered protein catabolism, tissue nitrogen content and nitrogenous waste excretion were quantified. CO2 exposure did not significantly impact embryonic metabolic rate, yolk sac depletion, or oil globule depletion, however, there was a significant decrease in metabolic rate at the latest measured yolk sac larval stage (36 h post fertilization). CO2-exposure led to a ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2022) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2023-04-18. ... Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Animalia
Chordata
Containers and aquaria 20-1000 L or < 1 m**2
Laboratory experiment
Laboratory strains
Nekton
Not applicable
Other metabolic rates
Pelagos
Reproduction
FOS Medical biotechnology
Respiration
Single species
Thunnus albacares
Type of study
Species, unique identification
Species, unique identification URI
Species, unique identification Semantic URI
Time in hours
Treatment
Replicate
Ammonia per individual
Urea per individual
Total nitrogen per individual
Ammonia excretion per individual
Urea excretion rate per individual
Total nitrogen excretion rate per individual
Identification
Oxygen consumption per individual
Size
Ratio
Temperature, water
Temperature, water, standard error
Salinity
Salinity, standard error
Oxygen, dissolved
Oxygen, dissolved, standard error
pH
pH, standard error
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard error
Alkalinity, total
Alkalinity, total, standard error
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
spellingShingle Animalia
Chordata
Containers and aquaria 20-1000 L or < 1 m**2
Laboratory experiment
Laboratory strains
Nekton
Not applicable
Other metabolic rates
Pelagos
Reproduction
FOS Medical biotechnology
Respiration
Single species
Thunnus albacares
Type of study
Species, unique identification
Species, unique identification URI
Species, unique identification Semantic URI
Time in hours
Treatment
Replicate
Ammonia per individual
Urea per individual
Total nitrogen per individual
Ammonia excretion per individual
Urea excretion rate per individual
Total nitrogen excretion rate per individual
Identification
Oxygen consumption per individual
Size
Ratio
Temperature, water
Temperature, water, standard error
Salinity
Salinity, standard error
Oxygen, dissolved
Oxygen, dissolved, standard error
pH
pH, standard error
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard error
Alkalinity, total
Alkalinity, total, standard error
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Heuer, Rachael M
Wang, Yadong
Pasparakis, Christina
Zhang, Wenlong
Scholey, Vernon
Margulies, Daniel
Grosell, Martin
Seawater carbonate chemistry and metabolic rate and nitrogenous waste handling in the early life stages of yellowfin tuna (Thunnus albacares) ...
topic_facet Animalia
Chordata
Containers and aquaria 20-1000 L or < 1 m**2
Laboratory experiment
Laboratory strains
Nekton
Not applicable
Other metabolic rates
Pelagos
Reproduction
FOS Medical biotechnology
Respiration
Single species
Thunnus albacares
Type of study
Species, unique identification
Species, unique identification URI
Species, unique identification Semantic URI
Time in hours
Treatment
Replicate
Ammonia per individual
Urea per individual
Total nitrogen per individual
Ammonia excretion per individual
Urea excretion rate per individual
Total nitrogen excretion rate per individual
Identification
Oxygen consumption per individual
Size
Ratio
Temperature, water
Temperature, water, standard error
Salinity
Salinity, standard error
Oxygen, dissolved
Oxygen, dissolved, standard error
pH
pH, standard error
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard error
Alkalinity, total
Alkalinity, total, standard error
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
description Ocean acidification is predicted to have a wide range of impacts on fish, but there has been little focus on broad-ranging pelagic fish species. Early life stages of fish are thought to be particularly susceptible to CO2 exposure, since acid-base regulatory faculties may not be fully developed. We obtained yellowfin tuna (Thunnus albacares) from a captive spawning broodstock population and exposed them to control or 1900 μatm CO2 through the first three days of development as embryos transitioned into yolk sac larvae. Metabolic rate, yolk sac depletion, and oil globule depletion were measured to assess overall energy usage. To determine if CO2 altered protein catabolism, tissue nitrogen content and nitrogenous waste excretion were quantified. CO2 exposure did not significantly impact embryonic metabolic rate, yolk sac depletion, or oil globule depletion, however, there was a significant decrease in metabolic rate at the latest measured yolk sac larval stage (36 h post fertilization). CO2-exposure led to a ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2022) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2023-04-18. ...
format Dataset
author Heuer, Rachael M
Wang, Yadong
Pasparakis, Christina
Zhang, Wenlong
Scholey, Vernon
Margulies, Daniel
Grosell, Martin
author_facet Heuer, Rachael M
Wang, Yadong
Pasparakis, Christina
Zhang, Wenlong
Scholey, Vernon
Margulies, Daniel
Grosell, Martin
author_sort Heuer, Rachael M
title Seawater carbonate chemistry and metabolic rate and nitrogenous waste handling in the early life stages of yellowfin tuna (Thunnus albacares) ...
title_short Seawater carbonate chemistry and metabolic rate and nitrogenous waste handling in the early life stages of yellowfin tuna (Thunnus albacares) ...
title_full Seawater carbonate chemistry and metabolic rate and nitrogenous waste handling in the early life stages of yellowfin tuna (Thunnus albacares) ...
title_fullStr Seawater carbonate chemistry and metabolic rate and nitrogenous waste handling in the early life stages of yellowfin tuna (Thunnus albacares) ...
title_full_unstemmed Seawater carbonate chemistry and metabolic rate and nitrogenous waste handling in the early life stages of yellowfin tuna (Thunnus albacares) ...
title_sort seawater carbonate chemistry and metabolic rate and nitrogenous waste handling in the early life stages of yellowfin tuna (thunnus albacares) ...
publisher PANGAEA
publishDate 2023
url https://dx.doi.org/10.1594/pangaea.957625
https://doi.pangaea.de/10.1594/PANGAEA.957625
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://cran.r-project.org/web/packages/seacarb/index.html
https://dx.doi.org/10.1016/j.cbpa.2023.111398
https://dx.doi.org/10.7266/7z48r4mc
https://cran.r-project.org/web/packages/seacarb/index.html
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_doi https://doi.org/10.1594/pangaea.95762510.1016/j.cbpa.2023.11139810.7266/7z48r4mc
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