CARD-FISH counts of the water column and sediment at HAUSGARTEN, Fram Strait

We determined the concentrations of different types of bacteria via Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH) at different depths of the water column as well as several centimeters of the surficial deep-sea sediment. Sampling sites were stations HGIV, EGI, and N4 o...

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Bibliographic Details
Main Author: Salman-Carvalho, Verena
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2019
Subjects:
CARD-FISH
cell counts
Hausgarten
Event label
Optional event label
Elevation of event
Latitude of event
Longitude of event
Date/Time of event
Method/Device of event
Sample material
DEPTH, water
DEPTH, sediment/rock
Depth, top/min
Depth, bottom/max
Microbial abundance, cells
Bacteria, targed with EUB338I-III oligonucleotide FISH-probe
Chloroflexi, targeted with CFX1223 and GNSB941 oligonucleotides FISH-probe
SAR202 clade, targeted with SAR202-312R oligonucleotide FISH-probe
Multicorer with television
CTD/Rosette
Fluorescence determination of DAPI stain
Catalysed reporter deposition-fluorescence in situ hybridization CARD-FISH
PS85
Polarstern
Assessment of bacterial life and matter cycling in deep-sea surface sediments ABYSS
Fram Strait
Online Access:https://dx.doi.org/10.1594/pangaea.903569
https://doi.pangaea.de/10.1594/PANGAEA.903569
Description
Summary:We determined the concentrations of different types of bacteria via Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH) at different depths of the water column as well as several centimeters of the surficial deep-sea sediment. Sampling sites were stations HGIV, EGI, and N4 of the long-term ecological research observatory HAUSGARTEN in the Fram Strait.

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