GBIF Occurrence Download
A dataset containing 312549 species occurrences available in GBIF matching the query: { "and" : [ "HasCoordinate is true", "TaxonKey is Betaproteobacteria", "HasGeospatialIssue is false" ] }. The dataset includes 312549 records from 240 constituent datasets: 3...
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| Format: | Dataset |
| Language: | unknown |
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The Global Biodiversity Information Facility
2019
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| Online Access: | https://dx.doi.org/10.15468/dl.u3y07k https://www.gbif.org/occurrence/download/0025851-190415153152247 |
| Summary: | A dataset containing 312549 species occurrences available in GBIF matching the query: { "and" : [ "HasCoordinate is true", "TaxonKey is Betaproteobacteria", "HasGeospatialIssue is false" ] }. The dataset includes 312549 records from 240 constituent datasets: 310 records from International Collection of Microorganisms from Plants (ICMP). 497 records from Baselines Initiative 16S rRNA gene dataset: Baselines Amplicon Release 1 (R1) Indian Ocean 2015. 1155 records from Comparative 16S analysis of hydrothermal vent samples from the Mid-Atlantic Ridge (MAR). 505 records from Arctic first-year drift ice and under-ice water bacterial communities. 402 records from Northern Gulf of Mexico Hypoxic Zone Raw sequence reads. 3521 records from Biological Impacts of Ocean Acidification. 52 records from Whale fall. 164 records from Microbial diversity of marine sediments from Ross Sea. 863 records from Seasonal and spatial diversity of bacterial communities in marine sediments of Ningbo Xiangshan Coastal Ocean. 46 records from Microbial diversity associated with copepods in the North Atlantic subtropical gyre. 106 records from Bacterial diversity in the South Adriatic Sea during winter of 2016. 164 records from marine sediment metagenome Raw sequence reads. 3 records from Archaea diversity in marine sediment. 1602 records from Polymetallic nodule field Targeted loci environmental. 1314 records from Po river Prodelta and Mar Piccolo of Taranto surface sediments bacterial communities targeted loci. 795 records from eDNA_Subseafloor. 126 records from The System-wide Information Network for Genetic Resources (SINGER). 493 records from Abyssal Baseline Study & Geophysical Survey (ABYSSLINE 02)_AB01_Re-sequenced Targeted loci environmental. 62 records from Marine methane seep Targeted Locus (Loci). 122 records from marine sediment metagenome Metagenome. 20 records from UK coast natural seawater Genome sequencing. 229 records from Incubation of marine methane seep sediments with a bioorthogonal amino acid. 2 records from Monitoring data from the federal state Saxony (Germany). 1116 records from Queensland Marine Sediment. 78 records from gas hydrate bearing sediment Raw sequence reads. 11772 records from Microbial community structure is affected by cropping sequences and bio-covers under long-term no-tillage. 9 records from Estudio de la microflora de los suelos de la zona de preservación ecológica 'La Uva' (Sinaloa) con vegetación de selva baja caducifolia empleando taxonomía molecular. 120 records from Xylophaga in situ Eclusion Experiment. 11 records from Marine metagenome ICM_LCR. 262 records from marine metagenome Raw sequence reads. 12717 records from Effects of organic matter manipulation on archaeal, bacterial, and fungal community assembly. 208 records from Microbial communities associated with ferromanganese nodules and the surrounding sediments. 262 records from photoautotrophic_biofilm. 858 records from Sea water sample Targeted Locus (Loci). 1237 records from Bacterial 16S rRNA gene sequencing of Antarctic soil. 494 records from Atlantic salmon microbiota. 5 records from Water and Sediment samples Targeted loci environmental. 300 records from Microbial indicators of anthropogenic marine pollution identified by 16S and 18S metagenomic library analysis. 1202 records from Microbial diversity in the Tongyeong-Geoje coastal area of Korea. 503 records from Microbial community structure and dynamics in the oxygen minimum zone of the Northeast subarctic Pacific Ocean. 21 records from Microbial Diversity in Antarctic marine sediments (Admiralty Bay and Bransfield Strait). 54 records from Microbial induced mineral precipitations caused by nitrate treatment for souring control during microbial enhanced oil recovery (MEOR). 149 records from Trichodesmium spiralis associated microbiome Targeted loci. 9 records from Vibrio-specific 16S rRNA sequences from seawater, sediment, and oyster hatchery samples. 3793 records from North Pacific Subtropical Gyre Microbial Community. 310 records from Seawater Targeted Locus (Loci). 73 records from SINGER Coordinator. 3083 records from Macroalgal Morphology affects composition and settlement of microbial communities. 833 records from Microbial diversity in the Tongyeong-Geoje coastal area of Korea. 14 records from Marine Water Column Samples Targeted loci environmental. 611 records from Microbial associations in temperate marine copepods from the Gulf of Maine. 1403 records from Bacterial communities from the water column and the surface sediments along a transect in the East Sea (Sea of Japan). 1 records from Ecología de comunidades microbianas en las aguas subterráneas de Cuatrociénegas, Coahuila. 1164 records from Marine metagenome Targeted loci environmental. 347 records from Prokaryotic community response to microalgal lysates. 190 records from Diet analysis of Japanese sardine and Pacific round herring larvae. 4 records from uncultured marine eukaryote Targeted loci environmental. 1146 records from Bacterial Diversity in the East China Sea. 19 records from marine sediment metagenome Raw sequence reads. 2 records from Comparative study in validity of three regions of 18S-rRNA for eukaryote amplicon sequence analyses. 284 records from Species-specific associations between bacterioplankton and photosynthetic picoeukaryotes. 1631 records from Impact of a major inflow event on the composition and distribution of bacterioplankton communities in the Baltic Sea. 2 records from Records of the DAFWA Plant Pathology Collection. 299 records from Microbial community in marine sediments. 153 records from Spirulina necromass degradartion in arctic marine sediments. 339 records from Antarctic Snow Algae 2014/15 16S and 18S Illumina Seq of snow algae communities around Ryder Bay, Antarctica. 243 records from Equatorial Pacific Ocean Targeted loci environmental. 19 records from suspended particulate matter Raw sequence reads. 46 records from CARBOM cruise 2013 flow cytometry sorted phytoplankton. 5 records from European Molecular Biology Laboratory Australian Mirror. 4186 records from Bacteria exposure experiment North Sea. 446 records from Microbial Processes and Biodiversity: OCEAN. 5317 records from EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods. 47 records from marine sediment metagenome Raw sequence reads. 13 records from Elaboración de la base de datos de la colección de cepas de bacterias fitopatógenas de la Dirección General de Sanidad Vegetal. 3 records from Lane 6 Analysis. 608 records from the assembly of abundant and rare bacterioplankton subcommunities in three subtropical bays. 22 records from Extracellular DNA marine sediment Targeted Locus (Loci). 1190 records from Reciprocal transplantation experiment of salt marsh sediments Targeted loci. 490 records from IMPACT OF SAHARAN DUST DEPOSITION ON BACTERIOPLANKTON IN MARINE SURFACE WATER. 259 records from CCA_pathobiome. 22 records from SAR amplicon from community incubated with various nanophytoplankton in microcosm. 2401 records from Little Sippewissett Marsh Targeted Locus (Loci). 123 records from Ocean sediment-basement interface Targeted Locus (Loci). 101 records from 3Soil16S. 100 records from Standard filtration practices significantly distort planktonic microbial diversity estimates. 483 records from Marine sediment Raw sequence reads. 22 records from Soil DNA extracted from Robinson Ridge, East Antarctica Raw sequence reads. 1423 records from Bacterial diversity in snow from mid-latitude mountain areas: Alps, Eastern Anatolia, Karakoram and Himalaya.. 2636 records from Microbial diversity in the Benguela coastal upwelling system as derived from 16S rRNA sequencing and RNA Stable Isotope Probing (SIP). 1097 records from A practical introduction to microbial molecular ecology through the use of iChips. 4740 records from Bacterias y Arqueas de la transición Andino-Amazónica del departamento del Caquetá - Proyecto Colombia BIO. 1508 records from Mariana and Kermadec Trench sediment 16S rRNA gene sequencing. 59 records from Dutch Foundation for Applied Water Research (STOWA) - Limnodata Neerlandica. 1374 records from ADDOMEx. 1486 records from Microbial diversity in the Tongyeong-Geoje coastal area of Korea2. 405 records from Marine bacteria metagenome. 112 records from Submarine Ligurian Canyons Water Prokaryotic and Protist Communities. 1368 records from Mediterranean Contaminated Pelagic communities. 1186 records from ADDOMEx Tier 3 Experiments: Mesocosm Si with Gulf of Mexico coastal waters. 134 records from 16S rRNA amplicon from marine Bacteria Raw sequence reads. 4 records from Biodiversidad microbiana de los ecosistemas marinos en la Isla Cayo Serrana durante la Expedición Seaflower 2016 - Proyecto Colombia BIO. 9 records from 16S analysis (pyrosequencing), Hainich grassland VIPs 2008. 1783 records from Marine Sediment from the Berkeley Bay Targeted Locus (Loci). 71 records from Hydrate Ridge, OR - Deep sea cold seep ecosystem Targeted Locus (Loci). 19 records from envinronment Metagenome. 39 records from marine Archaea metagenome. 325 records from Pelagic Gulf of Mexico Targeted loci environmental. 171 records from Shotgun Metagenomic Sequencing of the Arctic Ocean during Winter-Spring Transition. 170 records from VAG Mine Pit Pond Metagenome. 2 records from Collections and observation data National Museum of Natural History Luxembourg. 257 records from Gulf of Mexico open ocean Targeted Locus (Loci). 802 records from 16S amplicons Subtropical Frontal Zone New Zealand. 129 records from Comparison of copper contaminated soils, with similar uncontaminated controls.. 4 records from Cepario del Laboratorio de Microbiología y Mutagénesis Ambiental de la UIS (LMMA). 126 records from Sea water microorganisms Raw sequence reads. 358 records from Taxonomic study of endospores in a marine sediment. 528 records from 16S data describing Antarctic benthic sediment. 2 records from California Current Cruise CCE-P1408 Process Cruise #6. 4 records from Northern Gulf of Mexico Hypoxia can Alter Sediment Communities of Nitrifying Archaea. 32 records from ocean bacteria Metagenomic assembly. 1058 records from Diversity of bacterioneuston and bacterioplankton in coastal waters of Misaki, Japan. 1221 records from Nutrient addition mesocosm experiment Targeted Locus (Loci). 20 records from Eukaryotic natural population from Northern Baffin Bay - Raw sequence reads. 849 records from Marine methane seep Targeted Locus (Loci). 211 records from 15N methylamine SIP (WCO station L4). 3973 records from Zostera Marina Ammonification environmental. 1 records from Blue Mountains Swamp Archaea. 317 records from Biogeography of pelagic bacterioplankton across an antagonistic temperature-salinity gradient in the Red Sea. 1 records from Archaea Arctic Ocean Survey Targeted Locus (Loci). 5408 records from Bacterial 16s Amplicon Sequencing of the Atlantic Ocean. 10604 records from Geographically tagged INSDC sequences. 15 records from 16S rRNA gene (V2-V3 region) based analysis of soil procaryotic community composition, Alb VIPs 2008. 4 records from Marine metagenome ICM_AWP. 22 records from Microbial eukaryotes. 840 records from Temporal dynamics of the particle-attached and free-living microbial communities from coastal seawater. 217 records from Microbial communities in marine surface water. 2913 records from Abundance, diversity and distribution of Legionellales in wet environments in Sweden. 51 records from Diet analysis of Pacific Bluefin Tuna larvae. 4 records from Diversity of algae in wetlands. 1196 records from Sea spray aerosols at Three California Beaches. 6 records from Diesel contamination of Antarctic soils and sediments. 25 records from Ocean Acidification baceria sample Targeted loci environmental. 80 records from Southern Ocean. 6 records from Global Ocean Sampling Expedition. 2372 records from Effect of genetics and environment on gut bacteria in Anopheles and Aedes mosquitoes.. 1 records from CONN. 26 records from Marine metagenome ICM_JRV. 209 records from E1 Targeted Locus (Loci). 482 records from Caspian Sea Sediment - 16S Survey Targeted Locus (Loci). 3364 records from DEEPEND: Microbiome and bacterioplankton rRNA gene sequence data collected from Gulf of Mexico seawater samples. Cruises DP03 and DP04 from Jan 2016 - December 2016. 1 records from Microorganismos asociados con la filósfera de plantas de Espeletia en el PNN los Nevados. 762 records from Short-term interaction of pyrene and cadmium in prokaryotic community in coastal sediment microcosms. 76 records from Bacterial community dynamics during polysaccharide degradation at contrasting sites in the Southern and Atlantic Oceans. 20031 records from Nahant Collection. 1035 records from US East Coast Salt Marshes Targeted Locus (Loci). 449 records from aquatic bacterial metagenome Raw sequence reads. 25 records from rDNA amplicon sequencing of Western North Atlantic microbial community. 1 records from Paleobiology Database. 622 records from Variations in prokaryotic community assembly and predicted metabolic potential of surface sediments with geography in the coastal northern Zhejiang, East China Sea. 114 records from Zooplankton communities in the coastal water of northeastern Hokkaido. 2 records from Proyecto para compatibilizar el inventario de biota edáfica BGBD con el Sistema Nacional de Información sobre Biodiversidad. 132 records from CTD water column metabarcoding. 465 records from marine sediment metagenome Raw sequence reads. 466 records from Intertidal Mixing Zone Targeted Locus (Loci). 42 records from Metagenomic sequence from soil bacteria. 2646 records from Effects of Fecal Input, Environmental Conditions, and Environmental Sources on Enterococci Concentrations in an Estuarine Ecosystem. 47 records from Biodiversidad de grupos funcionales de microorganismos en el Parque Nacional Natural de Los Nevados, Colombia. 30 records from Metagenome data from DNA stable isotope probing of Stiffkey saltmarsh sediment microcosms to investigate methanogenesis from choline. 853 records from Patagonian fjord prokaryote community. 313 records from water Raw sequence reads. 13 records from A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes. 70 records from A study on microbial functional groups producing a climate related gas in the ocean. 1300 records from Bacteria in domestic water-storage containers with or without mosquito larvae. 1054 records from Microbiome profiling Schlöppnerbrunnen peat cores from different depths. 205 records from Community structure of Archaea in the western North Pacific and the Arctic Ocean. 185 records from marine sediment metagenome Targeted loci environmental. 47 records from Distinctive community structure and high diversity in particle-associated prokaryotes in tropical and subtropical Pacific Ocean surface seawater. 1 records from iNaturalist Research-grade Observations. 62 records from DSMZ Prokarya Collection Catalogue. 226 records from Santa Monica Basin seep sediment incubations to assess C and N sources for F430 synthesis. 229 records from dsrB sequencing of sulfate-reducing microbial communities in Skagerrak and Baltic sediment. 3424 records from Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.. 8128 records from Coral. 1221 records from Microbial Biogeography and Potential Ecological Function Deep Indian Ocean Ridge. 301 records from Comparison of marine sediments from the Beguela upwelling zone. 1355 records from 16S Amplicon Data from an Antarctic Cold Seep. 1 records from Bacterias y Actinobacterias aisladas del PNN los Nevados para estudios de actividad antimicriobana. 1092 records from Meta_Kosmos. 1090 records from Coastal seawater influenced by the municipal effluents Raw sequence reads. 9 records from White sea picoplankton Metagenome. 251 records from Baltic Sea. 272 records from A long-standing complex tropical dipole shapes marine microbial biogeography. 18 records from VIP_data_topsoil_jointsampling_microbiolgroups_2008_Heiko_Nacke. 95 records from Agents pathogènes responsables de maladies traitées à l'Hôpital de Mènontin (Cotonou, Sud-Bénin). 634 records from marine sediment metagenome Metagenome. 117 records from BrdU_MAB_SS Metagenome. 936 records from Biological rejuvenation of iron oxides in bioturbated marine sediments. 131 records from Amplicon sequencing of Tara Oceans RNA samples corresponding to size fractions for protists.. 110 records from Distributions and Abundances of Sublineages of the N2-Fixing Cyanobacterium Candidatus Atelocyanobacterium thalassa (UCYN-A) in the Noumea Lagoon. 539 records from Life in a toxic environment. 13168 records from MICROBIS database. 118 records from Ocean crust Targeted Locus (Loci). 8066 records from Sediment surface microbial community changes due to phytoplankton addition. 330 records from marine metagenome Targeted Locus (Loci). 203 records from Global Malaspina 2010 deep ocean expedition - rRNA pyrotags. 87 records from Marine subseafloor sediment Targeted Locus (Loci). 239 records from Cascading influence of inorganic nitrogen sources on DOM production composition lability and microbial community structure in the open ocean. 175 records from peptide incubation in GOM C6 seawater bacteria Metagenome. 1741 records from marine sediment metagenome Targeted loci environmental. 93799 records from Marine metagenomes Metagenome. 1 records from Complete list of isolated phyllosphere Methylobacterium strains. 1023 records from Nuunat- ORMS formation during oil biodegradation at low temperature. 23 records from Red Sea Zooplankton Raw sequence reads. 125 records from Diversity of archaeal and bacterial 16S rRNA gene in marine sediment in Aarhus Bay. 575 records from Red Sea microbial plankton Raw sequence reads. 15 records from De novo whole metagenome sequencing studies. 1060 records from Development and validation of a multi-trophic metabarcoding biotic index for benthic organic enrichment biomonitoring using a salmon farm case-study.. 466 records from Thermophilic endospores in temperate sediments. 1816 records from Bacterial Biogeography of Coastal Water in the Northern East China Sea. 89 records from Nitrate-storing microorganisms in sediments of the Bornholm Basin. 1 records from Research on Airborne Ice Nucleating Species. 134 records from 16S_Sediment_Bolinao. 549 records from Heterogeneity of methane seep microbiomes in the NE Pacific. 118 records from Mediterranean mud volcano flow Targeted loci. 1938 records from SCHEMA_Sediment. 233 records from South China Sea interfaces 16S amplicon sequencing. 5 records from Marine metagenome ICM_GPS. 173 records from Distribution of the Roseobacter clade. 48 records from Microbial diversity studies of Arabian Sea sediment. 107 records from Dark ocean microbial diversity. 2 records from MEL AVH data. 5 records from Sediment Metagenome. 133 records from Metagenomes of Sediments from Red Sea Atlantis II and Discovery Deep Brine Pools. 44 records from Metagenomic investigation of six depths from the anchialine Bundera sinkhole. 310 records from DDCA-metagenome. 461 records from marine sediment metagenome Targeted loci environmental. 7 records from Occurrences in SinBIOTA. 265 records from Sediment bacteria in the Southern Ocean. 23 records from Prospecting of extreme microbial ecosystems associated to minerals (microbialites, microbial mats and endoevaporites) in Puna, Wetlands and Salars of Argentina, Chile and Bolivia. Data from some individual datasets included in this download may be licensed under less restrictive terms. |
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