Occurrence Download
A dataset containing 19726 species occurrences available in GBIF matching the query: { "TaxonKey" : [ "is Rickettsia da Rocha-Lima, 1916" ] } The dataset includes 19726 records from 236 constituent datasets: 11 records from Comparative 16S analysis of hydrothermal vent samples fr...
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| Format: | Dataset |
| Language: | unknown |
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The Global Biodiversity Information Facility
2022
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| Online Access: | https://dx.doi.org/10.15468/dl.qsszmd https://www.gbif.org/occurrence/download/0194078-210914110416597 |
| Summary: | A dataset containing 19726 species occurrences available in GBIF matching the query: { "TaxonKey" : [ "is Rickettsia da Rocha-Lima, 1916" ] } The dataset includes 19726 records from 236 constituent datasets: 11 records from Comparative 16S analysis of hydrothermal vent samples from the Mid-Atlantic Ridge (MAR). 15 records from Baselines Initiative 16S rRNA gene dataset: Baselines Amplicon Release 1 (R1) Indian Ocean 2015. 15 records from Arctic first-year drift ice and under-ice water bacterial communities. 51 records from Biological Impacts of Ocean Acidification. 2 records from Northern Gulf of Mexico Hypoxic Zone Raw sequence reads. 1 records from Distinctive Microbial Community Structure in Highly Stratified Deep-Sea Brine Water Columns. 2 records from Seasonal and spatial diversity of bacterial communities in marine sediments of Ningbo Xiangshan Coastal Ocean. 1 records from Microbial diversity associated with copepods in the North Atlantic subtropical gyre. 1 records from microbial communities in long-term e-waste contaminated river sediments. 10159 records from NEON ticks sampled using drag cloths and tick pathogen status. 1 records from Po river Prodelta and Mar Piccolo of Taranto surface sediments bacterial communities targeted loci. 5 records from 16S rRNA amplicon sequences of Baltic Sea bacterioplankton. 3 records from Tucurui_Metagenoma_MGRAST. 15 records from Incubation of marine methane seep sediments with a bioorthogonal amino acid. 1 records from PREsediment Targeted Locus (Loci). 11 records from 16S rRNA sequences of bacterioplankton spatial distributions in the Baltic Proper. 1 records from Evaluation of filtration and DNA extraction methods for environmental DNA biodiversity assessments across multiple trophic levels.. 10 records from Queensland Marine Sediment. 61 records from Microbial community structure is affected by cropping sequences and bio-covers under long-term no-tillage. 2 records from Microbial diversity before and after tidal re-instatement. 99 records from Compost microbe establishment and growth in agricultural soils. 2 records from Camargue soil and sediment 16S community profiling. 34 records from Soil microbial diversity in the Maintenance of Exotic vs. Native Diversity experiment (depth study). 87 records from Effects of organic matter manipulation on archaeal, bacterial, and fungal community assembly. 3661 records from INSDC Host Organism Sequences. 2 records from Microbial community response on waste water discharge in recipient freshwater sediments. 3 records from This workpackage details only the prokaryote (Archaea and Bacteria) analyses for the MicroPolar project.. 12 records from Bacteria community in the southern East China Sea. 40 records from Metabarcoding surveys of the Arctic marine environment. 1 records from Fe3+ and Mn4+ - induced changes in microbial communities of boreal lake sediments. 9 records from Fluctuating redox regimes raw sequence reads. 6 records from Natural seawater bacterial community in exopolysaccharides utilization. 4 records from Coastal Sediment Bacterial Community Alterations in Association with Sudden Vegetation Dieback. 1 records from DSMZ Bacteria. 3 records from Depth profile of ancient sediments. 1 records from Sea water sample Targeted Locus (Loci). 4 records from Bacterial 16S rRNA gene sequencing of Antarctic soil. 1 records from Microbial indicators of anthropogenic marine pollution identified by 16S and 18S metagenomic library analysis. 5 records from Lake sediment sequencing. 13 records from It was verified the impact of irrigation treatments (wet, optimal, dry and very dry) and three potato cultivars on soil microbial community.. 2 records from The Indigo Project: a global citizen science Ocean survey. 2 records from 16S rRNA metagenomic investigation of arsenotrophic bacteriome of ground water and soil from arsenic-prone area of Bangladesh. 46 records from Temporal variation in pesticide biodegradation. 7 records from Impact of rainforest transformation on phylogenetic and functional diversity of soil prokaryotic communities in Sumatra (Indonesia). 9 records from Herbicide-incubated GBR lagoon microbiomes Targeted loci environmental. 21 records from Macroalgal Morphology affects composition and settlement of microbial communities. 1 records from Spatially differing bacterial communities in water columns of the northern Baltic Sea. 1 records from Arctic microbiome along Svalbard Cross Shelf transects. 2 records from Assessing the effects of salmon farming seabed enrichment using bacterial community diversity and high throughput sequencing. 414 records from Bacerial and archaeal diversity in Central Park. 1 records from INVESTIGATING THE MICROBIAL EUKARYOTIC COMMUNITIES IN THE SURFACE WATERS OF THE ARAFURA SEA AND CORAL SEA. 3 records from Marine Water Column Samples Targeted loci environmental. 1 records from Bacterial communities from the water column and the surface sediments along a transect in the East Sea (Sea of Japan). 3 records from Marine metagenome Targeted loci environmental. 2 records from Prokaryotic community response to microalgal lysates. 1 records from Bibliographie de la faune, la flore et la fonge de France métropolitaine et outre-mer - Bibliographique de la faune, la flore et la fonge de France métropolitaine et outre-mer. 1 records from Benthic Ocean Acidification. 6 records from CEFS_16S_ITS. 17 records from Baltic Sea high-frequency temporal study 2012 at the Linnaeus Microbial Observatory Targeted Locus (Loci). 43 records from Raw sequence reads from soil relic DNA study. 1 records from Enhanced pyrene and benzo[a]pyrene degradation by plant root and SMFC. 1 records from XRCWD sediment metagenome Metagenome. 11 records from Diet analysis of Japanese sardine and Pacific round herring larvae. 1 records from Marine bacteria Targeted Locus (Loci). 3 records from Rifle sediment bacterial community Targeted Locus (Loci). 1 records from California Current System Long Term Ecological Research P1604 (CCS_LTER_P1604) Targeted loci environmental. 3 records from Bacterial Diversity in the East China Sea. 1 records from Lonar sediment Raw sequence reads. 1 records from Species-specific associations between bacterioplankton and photosynthetic picoeukaryotes. 2 records from Impact of a major inflow event on the composition and distribution of bacterioplankton communities in the Baltic Sea. 1 records from magnetite Targeted Locus (Loci). 3 records from Antarctic Snow Algae 2014/15 16S and 18S Illumina Seq of snow algae communities around Ryder Bay, Antarctica. 1 records from Microbial Diversity in the Southwest Atlantic Ocean and Patagonian Freshwater Bodies. 5 records from Variation in freshwater stream sediment community 16S rRNA profiles along an urbanization gradient. 1389 records from INSDC Sequences. 8 records from Bacteria exposure experiment North Sea. 18 records from EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods. 1 records from Metagenome from mudbank Area,Alappuzha Kerala India. 2 records from solar evaporation pond sample Metagenome. 4 records from Groundwater microbiome. 2 records from Planktonic bacterial communities in the arctic Canada Basin and Kongsfjorden. 3 records from the assembly of abundant and rare bacterioplankton subcommunities in three subtropical bays. 1 records from NMNH Extant Specimen Records (USNM, US). 2 records from BSM marine Targeted Locus. 3 records from Sediment of acid mine drainage Targeted loci environmental. 2 records from Reciprocal transplantation experiment of salt marsh sediments Targeted loci. 3 records from Composition and Genetic Diversity of Microbial Communities in Subtropical Coastal Wetland Sediments. 1 records from Marine Bacteria 16S V4 Raw sequence reads. 24 records from Little Sippewissett Marsh Targeted Locus (Loci). 1 records from sediment metagenome Metagenome. 1 records from marine metagenome Targeted Locus (Loci). 2 records from Metagenomics of Jacarepagua Lagoon. 1 records from Marine sediment Raw sequence reads. 22 records from Bacterial Biomarkers of Marcellus Shale Activity in Pennsylvania. 7 records from Bacterial diversity in snow from mid-latitude mountain areas: Alps, Eastern Anatolia, Karakoram and Himalaya.. 158 records from 16S amplicons New Zealand agricultural soils. 118 records from marine metagenome Metagenome. 3 records from A practical introduction to microbial molecular ecology through the use of iChips. 1 records from Bacterias y Arqueas de la transición Andino-Amazónica del departamento del Caquetá - Proyecto Colombia BIO. 1 records from Mariana and Kermadec Trench sediment 16S rRNA gene sequencing. 263 records from Microbial communities associated with Eurasian watermilfoil, water and sediment. 2 records from Methanogens and iron-reducing bacteria are major contributors to mercury methylation in boreal lake sediments. 2 records from Bermuda Atlantic Time-series Study metagenomes. 46 records from Queensland Museum provider for OZCAM. 1 records from Sediment bacterial 16S in Hachiro polder.. 1 records from Eukaryote diversity assessment of sediments of the Western English Channel. 6 records from MeHg Coal Ash. 5 records from Non-target effects of Metarhizium brunneum on soil microbial communities. 2 records from Marine Sediment from the Berkeley Bay Targeted Locus (Loci). 1 records from Chandeleur Island 2016 Amplicon Study Raw sequence reads. 29 records from Microbial biogeography of 925 geothermal springs in New Zealand. 2 records from Assessing the microbial diversity in Cape Comorin ocean water. 4 records from 16S data describing Antarctic benthic sediment. 1 records from Ghent University - Zoology Museum - Insect collection. 1 records from rRNA, rDNA bacteria thaw ponds Targeted loci environmental. 2 records from Diversity of bacterioneuston and bacterioplankton in coastal waters of Misaki, Japan. 2 records from Nutrient addition mesocosm experiment Targeted Locus (Loci). 24 records from Marine methane seep Targeted Locus (Loci). 1 records from marine metagenome. 1 records from Characteristics of bacterial communities in the deep sediment Lake Baikal from the regions with oil and gases discharging. 45 records from Response of soil bacteria to anthropogenic soil variables at large spatial scales. 1 records from ETNP Targeted Locus (Loci). 1 records from Zostera Marina Ammonification environmental. 116 records from Organic agricultural field soil Raw sequence reads. 3 records from estuary metagenome Raw sequence reads. 5 records from Bacterial 16s Amplicon Sequencing of the Atlantic Ocean. 11 records from Prokaryotic microbial communities structure in the headwater watchment of Dongjiang River in the south of China. 5 records from Eastern offshore environmental monitoring of Krishna Godavari Basin Bay of Bengal 2013-2016, Funded by: ONGC India. 1 records from Microbial communities in marine surface water. 4 records from Abundance, diversity and distribution of Legionellales in wet environments in Sweden. 4 records from FBIP: Survey of invertebrate and microbial diversity of the Prince Edward Islands system. 13 records from Sea spray aerosols at Three California Beaches. 5 records from North Sea plastic incubation and reference communities, raw sequence reads. 1 records from Cryoconite sediments Targeted Locus (Loci). 1 records from 16S rRNA genes Random survey. 6 records from Effect of genetics and environment on gut bacteria in Anopheles and Aedes mosquitoes.. 7 records from Baselines Initiative 16S rRNA gene dataset: Baselines Amplicon Release 1 (R1) Caribbean Sea near Curacao (including saline pond samples in Curacao) 2015. 11 records from Natural History Museum (London) Collection Specimens. 4 records from Microbial biogeography of French caves. 33 records from Saltern of Margherita di Savoia Metagenome. 1 records from Caspian Sea Sediment - 16S Survey Targeted Locus (Loci). 9 records from Shotgun Metagenome Sequencing of Lake Soyang. 20 records from DEEPEND: Microbiome and bacterioplankton rRNA gene sequence data collected from Gulf of Mexico seawater samples. Cruises DP03 and DP04 from Jan 2016 - December 2016. 3 records from anchialine metagenome Raw sequence reads. 1 records from Bacterial community profiles in a bioreduced uranium contaminated site after reoxidation. 316 records from Nahant Collection. 81 records from Who eats the tough stuff DNA stable isotope probing (SIP) of bacteria and fungi degrading 13C-labelled lignin and cellulose in forest soils. 34 records from Marine (Aarhus) and freshwater (Lake Constance) sediment Raw sequence reads. 1 records from rDNA amplicon sequencing of Western North Atlantic microbial community. 1 records from Variations in prokaryotic community assembly and predicted metabolic potential of surface sediments with geography in the coastal northern Zhejiang, East China Sea. 12 records from Zooplankton communities in the coastal water of northeastern Hokkaido. 1 records from marine sediment metagenome Targeted loci environmental. 9 records from Coral-associated bacteria demonstrate phylosymbiosis and cophylogeny. 1 records from marine sediment metagenome Raw sequence reads. 1 records from Microbial diversity. 4 records from Ice Wedge Polygon. 4 records from Effects of Fecal Input, Environmental Conditions, and Environmental Sources on Enterococci Concentrations in an Estuarine Ecosystem. 211 records from uncultured prokaryote Targeted loci environmental. 8 records from Eukaryotic diversity in Central Park. 1 records from Antimony contaminated sediments Raw sequence reads. 1 records from Pelagic Microbiome: viruses to protists. 16S and 18S data from oceanic samples collected at the chlorophyll maximum.. 1 records from Patagonian fjord prokaryote community. 1 records from MiSeq 16S rRNA gene (prokaryotic 16S rRNA gene) sequences of 33 Mai Po sediments, including 18 samples from winter and 15 samples from summer. 8 records from Metabarcoding Data from an Inventory of Freshwater Invertebrates from the Miller Creek Watershed, Kenai Peninsula, Alaska, USA. 2 records from There are 3 zooplankton samples from 3 different ponds, we collected sample and use the fresh samples to do DNA extraction directly, then mix them with adjustment guided by the number of species within each of them. At last, use Hiseq-2599 PE-150 to do NGS work. 10 records from Marine metagenomes from the bioGEOTRACES project. 76 records from INSDC Environment Sample Sequences. 1 records from Microbial communities in the ocean Raw sequence reads. 1 records from Bacteria in domestic water-storage containers with or without mosquito larvae. 8 records from Microbiome profiling Schlöppnerbrunnen peat cores from different depths. 12 records from Microbial diversity in benthic stream sediment. 2 records from Antarctic Hypersaline Brine Raw sequence reads. 1 records from iNaturalist Research-grade Observations. 3 records from DSMZ Prokarya Collection Catalogue. 4 records from Santa Monica Basin seep sediment incubations to assess C and N sources for F430 synthesis. 10 records from marine metagenome Metagenome. 23 records from Coral. 268 records from Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.. 4 records from Soil Microbial communities from weed germination bioassay targeted loci environmental. 1 records from 16S rDNA amplicon of Bacteria and Archaea Metagenome. 9 records from 16S Amplicon Data from an Antarctic Cold Seep. 1 records from Coastal seawater influenced by the municipal effluents Raw sequence reads. 1 records from 16S data from: Diversity of Pico- to Mesoplankton along the 2000 km Salinity Gradient of the Baltic Sea (Hu et al. 2016). 5 records from Bacterial communities in agricultural soils under contrasting agronomic managements and biomes of Argentina. 2 records from Polymetallic nodule field Targeted loci environmental. 5 records from Temporal sampling of marine metagenomes from Station ALOHA and BATS. 171 records from Soil marker gene sequences across the Nutrient Network. 1 records from A long-standing complex tropical dipole shapes marine microbial biogeography. 6 records from Transplant and re-transplant microcosms of Baltic Proper and Bothnian Sea bacterioplankton Targeted Locus (Loci). 1 records from Shotgun metagenomic analysis of Lake Paajarvi sediment microbes.. 15 records from soil metagenome Raw sequence reads. 1 records from environmental sample sequencing. 1 records from Archaea. 5 records from the under-explored coal gangue and the adjacent acid mine drainage creek soil Raw sequence reads. 1 records from marine sediment metagenome Metagenome. 4 records from Microbial diversity of marine sediments. 1 records from sediment metagenome Raw sequence reads. 1 records from Biological rejuvenation of iron oxides in bioturbated marine sediments. 153 records from MGYS00005313. 23 records from Bacterial 23S Ribosomal RNA RefSeq Targeted Loci Project. 15 records from Amplicon sequencing of Tara Oceans RNA samples corresponding to size fractions for protists.. 27 records from Bacterial diversity and community composition in grassland and forest soils of the German Biodiversity Exploratories. 1 records from Genetic potential for pentachlorophenol degradation at historically contaminated groundwater sites. 3 records from Bacteria in Anopheles darlingi breeding sites in Manaus, the Amazon, Brazil. 2 records from Bacterial communities from Thrombolites of Lake Sarmiento. 1 records from DOW-2. 1 records from Metagenome microbial communities of bottom sediments of the Kara Sea. 217 records from MICROBIS database. 72 records from Sediment surface microbial community changes due to phytoplankton addition. 3 records from Temporal effect of plant diversity and oiling on nitrogen cycling in marsh sediments. 10 records from bacterial community in the deep-sea surface sediments. 1 records from Diversities of bacteria and archaea in Sanya mangrove sediments. 2 records from Seawater metagenome Targeted loci environmental. 22 records from Soil bacterial communities (Hainich National Park). 70 records from Soil bacterial diversity is associated with human population density in urban greenspaces. 23 records from Bacterial 5S Ribosomal RNA RefSeq Targeted Loci Project. 10 records from Soil microbial response to organic disturbances. 25 records from Soil microbial distribution. 8 records from Zooplankton microbiome of the Amazon River Plume and western trophic North Atlantic. 84 records from Marine metagenomes Metagenome. 1 records from NEW-1. 1 records from soil bacteria and fungi Targeted loci environmental. 1 records from Red Sea microbial plankton Raw sequence reads. 1 records from De novo whole metagenome sequencing studies. 1 records from Thermophilic endospores in temperate sediments. 1 records from seawater metagenome Metagenome. 2 records from SCHEMA_Sediment. 7 records from ATCC Bacteria Collection Catalog. 1 records from Marine sediment metagenome. 5 records from Sediment Metagenome Raw sequence reads. 2 records from Microbial community of Red Sea (16S amplicon) Targeted Locus (Loci). 1 records from NEW-2. 2 records from marine methane seep Targeted Locus (Loci). 76 records from Niche partitioning of methanotrophs in stratified lakes. 2 records from Sea ice and seawater Raw sequence reads. 37 records from Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project. Data from some individual datasets included in this download may be licensed under less restrictive terms. |
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