GBIF Occurrence Download
A dataset containing 501203 species occurrences available in GBIF matching the query: { "and" : [ "BasisOfRecord is Material sample", "TaxonKey is Actinobacteria" ] }. The dataset includes 501203 records from 262 constituent datasets: 821 records from Baselines Initiati...
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| Format: | Dataset |
| Language: | unknown |
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The Global Biodiversity Information Facility
2019
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| Online Access: | https://dx.doi.org/10.15468/dl.6n9q06 https://www.gbif.org/occurrence/download/0017244-190621201848488 |
| Summary: | A dataset containing 501203 species occurrences available in GBIF matching the query: { "and" : [ "BasisOfRecord is Material sample", "TaxonKey is Actinobacteria" ] }. The dataset includes 501203 records from 262 constituent datasets: 821 records from Baselines Initiative 16S rRNA gene dataset: Baselines Amplicon Release 1 (R1) Indian Ocean 2015. 336 records from Mesocosm Targeted Locus (Loci). 1892 records from Comparative 16S analysis of hydrothermal vent samples from the Mid-Atlantic Ridge (MAR). 788 records from Arctic first-year drift ice and under-ice water bacterial communities. 835 records from Northern Gulf of Mexico Hypoxic Zone Raw sequence reads. 5754 records from Biological Impacts of Ocean Acidification. 20 records from Whale fall. 117 records from Microbial diversity of marine sediments from Ross Sea. 20 records from 16S and 18S sequences from the epiphytic biofilm on leaves of Enhalus acroides. 1697 records from Seasonal and spatial diversity of bacterial communities in marine sediments of Ningbo Xiangshan Coastal Ocean. 65 records from Microbial diversity associated with copepods in the North Atlantic subtropical gyre. 207 records from Bacterial diversity in the South Adriatic Sea during winter of 2016. 657 records from marine sediment metagenome Raw sequence reads. 5 records from Archaea diversity in marine sediment. 1532 records from Polymetallic nodule field Targeted loci environmental. 1496 records from Po river Prodelta and Mar Piccolo of Taranto surface sediments bacterial communities targeted loci. 1977 records from eDNA_Subseafloor. 718 records from Abyssal Baseline Study & Geophysical Survey (ABYSSLINE 02)_AB01_Re-sequenced Targeted loci environmental. 185 records from Marine methane seep Targeted Locus (Loci). 190 records from marine sediment metagenome Metagenome. 1 records from Anammox bacteria in surface sediments of South China Sea. 359 records from 16S rRNA metagenomic investigation of arsenotrophic bacteriome of ground water and soil from arsenic-prone area of Bangladesh. 95 records from Microcosms Metagenome. 18148 records from Effects of organic matter manipulation on archaeal, bacterial, and fungal community assembly. 1058 records from This workpackage details only the prokaryote (Archaea and Bacteria) analyses for the MicroPolar project.. 215 records from Microbial communities associated with ferromanganese nodules and the surrounding sediments. 4 records from Seawater Metagenome. 69 records from Marine Metagenome. 1019 records from photoautotrophic_biofilm. 1921 records from Sea water sample Targeted Locus (Loci). 3095 records from Bacterial 16S rRNA gene sequencing of Antarctic soil. 169 records from Atlantic salmon microbiota. 47 records from Water and Sediment samples Targeted loci environmental. 143 records from Microbial indicators of anthropogenic marine pollution identified by 16S and 18S metagenomic library analysis. 1429 records from Microbial diversity in the Tongyeong-Geoje coastal area of Korea. 8572 records from It was verified the impact of irrigation treatments (wet, optimal, dry and very dry) and three potato cultivars on soil microbial community.. 49 records from Habitat and host related variation in sponge bacterial communities in Indonesian coral reefs and marine lakes. 521 records from Microbial community structure and dynamics in the oxygen minimum zone of the Northeast subarctic Pacific Ocean. 160 records from 16S rRNA metagenomic investigation of arsenotrophic bacteriome of ground water and soil from arsenic-prone area of Bangladesh. 90 records from Microbial Diversity in Antarctic marine sediments (Admiralty Bay and Bransfield Strait). 24 records from Microbial induced mineral precipitations caused by nitrate treatment for souring control during microbial enhanced oil recovery (MEOR). 292 records from Trichodesmium spiralis associated microbiome Targeted loci. 2811 records from North Pacific Subtropical Gyre Microbial Community. 281 records from Seawater Targeted Locus (Loci). 5461 records from Macroalgal Morphology affects composition and settlement of microbial communities. 810 records from Microbial diversity in the Tongyeong-Geoje coastal area of Korea. 16 records from Marine Water Column Samples Targeted loci environmental. 667 records from Microbial associations in temperate marine copepods from the Gulf of Maine. 920 records from Bacterial communities from the water column and the surface sediments along a transect in the East Sea (Sea of Japan). 106 records from AllDist Targeted Locus (Loci). 1267 records from Marine metagenome Targeted loci environmental. 700 records from Prokaryotic community response to microalgal lysates. 2910 records from Baltic Sea high-frequency temporal study 2012 at the Linnaeus Microbial Observatory Targeted Locus (Loci). 705 records from Effect of size fractionation and DNA extraction on the diversity and composition of prokaryotic and eukaryotic plankton community. 752 records from resuscitation mechanisms during enrichment culture. 164 records from Diet analysis of Japanese sardine and Pacific round herring larvae. 349 records from Marine bacteria Targeted Locus (Loci). 1 records from uncultured marine eukaryote Targeted loci environmental. 4571 records from Bacterial Diversity in the East China Sea. 1013 records from Limited influence of primary treated sewage waters on bacterial abundance, production and community composition in coastal seawaters. 99 records from marine sediment metagenome Raw sequence reads. 428 records from Species-specific associations between bacterioplankton and photosynthetic picoeukaryotes. 3615 records from Impact of a major inflow event on the composition and distribution of bacterioplankton communities in the Baltic Sea. 1009 records from Microbial community in marine sediments. 1639 records from Oceanic microplankton do not adhere to the latitudinal diversity gradient. 372 records from Spirulina necromass degradartion in arctic marine sediments. 351 records from Antarctic Snow Algae 2014/15 16S and 18S Illumina Seq of snow algae communities around Ryder Bay, Antarctica. 469 records from Equatorial Pacific Ocean Targeted loci environmental. 68 records from suspended particulate matter Raw sequence reads. 2 records from CARBOM cruise 2013 flow cytometry sorted phytoplankton. 3954 records from Bacteria exposure experiment North Sea. 1004 records from Microbial Processes and Biodiversity: OCEAN. 8632 records from EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods. 115 records from marine sediment metagenome Raw sequence reads. 175 records from Diversity and composition of sediment microbial assemblages in an Atlantic port environment. 564 records from Groundwater microbiome. 967 records from the assembly of abundant and rare bacterioplankton subcommunities in three subtropical bays. 39 records from Extracellular DNA marine sediment Targeted Locus (Loci). 1581 records from Reciprocal transplantation experiment of salt marsh sediments Targeted loci. 390 records from MiSeq 16S rRNA gene (prokaryotic 16S rRNA gene) sequences of 16 SCS sediments. 629 records from IMPACT OF SAHARAN DUST DEPOSITION ON BACTERIOPLANKTON IN MARINE SURFACE WATER. 324 records from CCA_pathobiome. 26 records from SAR amplicon from community incubated with various nanophytoplankton in microcosm. 1743 records from Little Sippewissett Marsh Targeted Locus (Loci). 224 records from Ocean sediment-basement interface Targeted Locus (Loci). 115 records from Aarhus Bay sediment PCR amplified product sequencing. 222 records from 3Soil16S. 288 records from Standard filtration practices significantly distort planktonic microbial diversity estimates. 1207 records from Marine sediment Raw sequence reads. 197 records from Soil DNA extracted from Robinson Ridge, East Antarctica Raw sequence reads. 2929 records from Bacterial diversity in snow from mid-latitude mountain areas: Alps, Eastern Anatolia, Karakoram and Himalaya.. 1 records from Mount Hope Bay bacteria Targeted Locus (Loci). 3836 records from Microbial diversity in the Benguela coastal upwelling system as derived from 16S rRNA sequencing and RNA Stable Isotope Probing (SIP). 1543 records from A practical introduction to microbial molecular ecology through the use of iChips. 5769 records from Bacterias y Arqueas de la transición Andino-Amazónica del departamento del Caquetá - Proyecto Colombia BIO. 2083 records from Mariana and Kermadec Trench sediment 16S rRNA gene sequencing. 526 records from Bacterial communitiy compositions on natural and artificial substrates in the Spermonde Archipelago, Indonesia. 1357 records from ADDOMEx. 1962 records from Microbial diversity in the Tongyeong-Geoje coastal area of Korea2. 591 records from Marine bacteria metagenome. 395 records from Submarine Ligurian Canyons Water Prokaryotic and Protist Communities. 69 records from Seawater bacteria Metagenome. 319 records from Coral or reef-seawater associated bacteria Targeted Locus (Loci). 1110 records from Mediterranean Contaminated Pelagic communities. 2046 records from ADDOMEx Tier 3 Experiments: Mesocosm Si with Gulf of Mexico coastal waters. 564 records from 16S rRNA amplicon from marine Bacteria Raw sequence reads. 5973 records from Diversity of microbial community (bacteria, micro-eukaryotes and fungi) in the Passage of Lascaux Cave.. 1430 records from Marine Sediment from the Berkeley Bay Targeted Locus (Loci). 100 records from Hydrate Ridge, OR - Deep sea cold seep ecosystem Targeted Locus (Loci). 59 records from envinronment Metagenome. 18 records from marine Archaea metagenome. 602 records from Pelagic Gulf of Mexico Targeted loci environmental. 196 records from Shotgun Metagenomic Sequencing of the Arctic Ocean during Winter-Spring Transition. 172 records from VAG Mine Pit Pond Metagenome. 479 records from Gulf of Mexico open ocean Targeted Locus (Loci). 1627 records from 16S amplicons Subtropical Frontal Zone New Zealand. 303 records from Comparison of copper contaminated soils, with similar uncontaminated controls.. 280 records from Sea water microorganisms Raw sequence reads. 1211 records from Taxonomic study of endospores in a marine sediment. 587 records from 16S data describing Antarctic benthic sediment. 8 records from California Current Cruise CCE-P1408 Process Cruise #6. 26 records from Northern Gulf of Mexico Hypoxia can Alter Sediment Communities of Nitrifying Archaea. 76 records from Distribution and composition of thiotrophic mats in the hypoxic zone of the Black Sea (150-170m water depth, Crimea margin). 30 records from ocean bacteria Metagenomic assembly. 924 records from Diversity of bacterioneuston and bacterioplankton in coastal waters of Misaki, Japan. 1820 records from Nutrient addition mesocosm experiment Targeted Locus (Loci). 107 records from Eukaryotic natural population from Northern Baffin Bay - Raw sequence reads. 2028 records from Marine methane seep Targeted Locus (Loci). 138 records from 15N methylamine SIP (WCO station L4). 6393 records from Zostera Marina Ammonification environmental. 1 records from Blue Mountains Swamp Archaea. 337 records from Biogeography of pelagic bacterioplankton across an antagonistic temperature-salinity gradient in the Red Sea. 10114 records from Bacterial 16s Amplicon Sequencing of the Atlantic Ocean. 656 records from Geographically tagged INSDC sequences. 69 records from Dissolved compounds excreted by copepods reshape the diversity and the activity of marine bacterioplankton community. 2 records from Marine metagenome ICM_AWP. 10 records from Microbial eukaryotes. 1864 records from Temporal dynamics of the particle-attached and free-living microbial communities from coastal seawater. 536 records from Microbial communities in marine surface water. 2 records from Marine sediment metagenome ICM_FIS. 256 records from Gulf Oil Spill underwater oil plume samples Targeted Locus (Loci). 2536 records from Abundance, diversity and distribution of Legionellales in wet environments in Sweden. 41 records from Diet analysis of Pacific Bluefin Tuna larvae. 2527 records from Sea spray aerosols at Three California Beaches. 54 records from Diesel contamination of Antarctic soils and sediments. 279 records from Southern Ocean microorganisms Targeted Locus (Loci). 3 records from Marine sediment metagenome ICM_NZS. 71 records from Ocean Acidification baceria sample Targeted loci environmental. 52 records from Southern Ocean. 8 records from Metabolically active microbial communities in marine sediment under high-CO2 and low-pH extremes. 30 records from Global Ocean Sampling Expedition. 2538 records from Effect of genetics and environment on gut bacteria in Anopheles and Aedes mosquitoes.. 80 records from Ocean Water Metagenome. 116 records from Bacterial communities in sandy sediment at submarine volcanic vents off Panarea Island (Italy). 540 records from E1 Targeted Locus (Loci). 4114 records from Microbial biogeography of French caves. 1061 records from Caspian Sea Sediment - 16S Survey Targeted Locus (Loci). 7300 records from DEEPEND: Microbiome and bacterioplankton rRNA gene sequence data collected from Gulf of Mexico seawater samples. Cruises DP03 and DP04 from Jan 2016 - December 2016. 1330 records from Short-term interaction of pyrene and cadmium in prokaryotic community in coastal sediment microcosms. 131 records from Bacterial community dynamics during polysaccharide degradation at contrasting sites in the Southern and Atlantic Oceans. 36519 records from Nahant Collection. 1342 records from US East Coast Salt Marshes Targeted Locus (Loci). 1019 records from aquatic bacterial metagenome Raw sequence reads. 56 records from rDNA amplicon sequencing of Western North Atlantic microbial community. 1111 records from Variations in prokaryotic community assembly and predicted metabolic potential of surface sediments with geography in the coastal northern Zhejiang, East China Sea. 52 records from Zooplankton communities in the coastal water of northeastern Hokkaido. 26 records from Metagenetic analysis of the 18S nuclear small subunit ribosomal RNA gene of a mixed zooplankton assemblage was carried out using the 454 pyrosequencing platform.. 116 records from CTD water column metabarcoding. 1009 records from marine sediment metagenome Raw sequence reads. 437 records from Intertidal Mixing Zone Targeted Locus (Loci). 58 records from Metagenomic sequence from soil bacteria. 2296 records from Effects of Fecal Input, Environmental Conditions, and Environmental Sources on Enterococci Concentrations in an Estuarine Ecosystem. 247 records from Deep mud-volcano biosphere in the Nankai accretionary wedge. 488 records from Pelagic Microbiome: viruses to protists. 16S and 18S data from oceanic samples collected at the chlorophyll maximum.. 83 records from Metagenome data from DNA stable isotope probing of Stiffkey saltmarsh sediment microcosms to investigate methanogenesis from choline. 85 records from UK coast natural seawater Genome sequencing. 1765 records from Incubation of marine methane seep sediments with a bioorthogonal amino acid. 625 records from 16S rRNA sequences of bacterioplankton spatial distributions in the Baltic Proper. 1656 records from Queensland Marine Sediment. 211 records from gas hydrate bearing sediment Raw sequence reads. 26225 records from Microbial community structure is affected by cropping sequences and bio-covers under long-term no-tillage. 239 records from Xylophaga in situ Eclusion Experiment. 9 records from Marine metagenome ICM_LCR. 358 records from marine metagenome Raw sequence reads. 118 records from archaeal community in Haima cold seep in SCS. 1268 records from Patagonian fjord prokaryote community. 398 records from water Raw sequence reads. 28 records from Hydrothermal Deposit Targeted Locus (Loci). 59 records from A study on microbial functional groups producing a climate related gas in the ocean. 9 records from Anammox bacteria in sediment cores of Daya Bay, China. 166 records from Studies of marine microbial dark matter. 1130 records from Bacteria in domestic water-storage containers with or without mosquito larvae. 1170 records from Microbiome profiling Schlöppnerbrunnen peat cores from different depths. 292 records from Community structure of Archaea in the western North Pacific and the Arctic Ocean. 291 records from marine sediment metagenome Targeted loci environmental. 95 records from Distinctive community structure and high diversity in particle-associated prokaryotes in tropical and subtropical Pacific Ocean surface seawater. 1 records from Diversity and structure of benthic bacterial community from South-Eastern Pacific Ocean, Targeted Locus (Loci). 954 records from Santa Monica Basin seep sediment incubations to assess C and N sources for F430 synthesis. 273 records from dsrB sequencing of sulfate-reducing microbial communities in Skagerrak and Baltic sediment. 1852 records from Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.. 15555 records from Coral. 2259 records from Microbial Biogeography and Potential Ecological Function Deep Indian Ocean Ridge. 496 records from Comparison of marine sediments from the Beguela upwelling zone. 2692 records from 16S Amplicon Data from an Antarctic Cold Seep. 2199 records from Meta_Kosmos. 1168 records from Coastal seawater influenced by the municipal effluents Raw sequence reads. 1 records from White sea picoplankton Metagenome. 425 records from Baltic Sea. 853 records from Transplant and re-transplant microcosms of Baltic Proper and Bothnian Sea bacterioplankton Targeted Locus (Loci). 790 records from A long-standing complex tropical dipole shapes marine microbial biogeography. 252 records from Shotgun metagenomic analysis of Lake Paajarvi sediment microbes.. 462 records from Archaea. 3103 records from marine sediment metagenome Metagenome. 84 records from BrdU_MAB_SS Metagenome. 1743 records from Biological rejuvenation of iron oxides in bioturbated marine sediments. 58 records from Amplicon sequencing of Tara Oceans RNA samples corresponding to size fractions for protists.. 999 records from Arctic Ocean. 157 records from Distributions and Abundances of Sublineages of the N2-Fixing Cyanobacterium Candidatus Atelocyanobacterium thalassa (UCYN-A) in the Noumea Lagoon. 1164 records from Life in a toxic environment. 1 records from Marine metagenome ICM_VAG. 86 records from Ocean crust Targeted Locus (Loci). 8172 records from Sediment surface microbial community changes due to phytoplankton addition. 695 records from marine metagenome Targeted Locus (Loci). 276 records from Green Edge microcosms Raw sequence reads. 623 records from Global Malaspina 2010 deep ocean expedition - rRNA pyrotags. 181 records from Marine subseafloor sediment Targeted Locus (Loci). 635 records from Cascading influence of inorganic nitrogen sources on DOM production composition lability and microbial community structure in the open ocean. 254 records from peptide incubation in GOM C6 seawater bacteria Metagenome. 43 records from Porcupine Seabight 16S Ribosomal RNA. 171 records from Municipal Pensacola Beach Sand Metagenome. 8674 records from Soil microbial response to organic disturbances. 2233 records from marine sediment metagenome Targeted loci environmental. 134957 records from Marine metagenomes Metagenome. 1464 records from Nuunat- ORMS formation during oil biodegradation at low temperature. 11 records from Red Sea Zooplankton Raw sequence reads. 424 records from Diversity of archaeal and bacterial 16S rRNA gene in marine sediment in Aarhus Bay. 1506 records from Red Sea microbial plankton Raw sequence reads. 29 records from De novo whole metagenome sequencing studies. 341 records from Coastal eutrophication controls the bacterial community composition in different reef habitats of the Spermonde Archipelago, Indonesia.. 2911 records from Development and validation of a multi-trophic metabarcoding biotic index for benthic organic enrichment biomonitoring using a salmon farm case-study.. 1264 records from Thermophilic endospores in temperate sediments. 114 records from Diversity and abundance of Bathyarchaeota (MCG) in South China Sea sediments and the implication of its ecological roles. 3712 records from Bacterial Biogeography of Coastal Water in the Northern East China Sea. 75 records from Nitrate-storing microorganisms in sediments of the Bornholm Basin. 17 records from Research on Airborne Ice Nucleating Species. 602 records from 16S_Sediment_Bolinao. 1402 records from Heterogeneity of methane seep microbiomes in the NE Pacific. 392 records from Diversity of SE Pacific benthic Bacteria and Archaea communities Targeted Locus (Loci). 169 records from Mediterranean mud volcano flow Targeted loci. 8998 records from SCHEMA_Sediment. 1085 records from South China Sea interfaces 16S amplicon sequencing. 5 records from Marine metagenome ICM_GPS. 304 records from Distribution of the Roseobacter clade. 130 records from Microbial diversity studies of Arabian Sea sediment. 201 records from Dark ocean microbial diversity. 89 records from Sediment Metagenome. 154 records from Metagenomes of Sediments from Red Sea Atlantis II and Discovery Deep Brine Pools. 232 records from Metagenomic investigation of six depths from the anchialine Bundera sinkhole. 315 records from DDCA-metagenome. 1973 records from marine sediment metagenome Targeted loci environmental. 561 records from Sediment bacteria in the Southern Ocean. 37 records from Prospecting of extreme microbial ecosystems associated to minerals (microbialites, microbial mats and endoevaporites) in Puna, Wetlands and Salars of Argentina, Chile and Bolivia. Data from some individual datasets included in this download may be licensed under less restrictive terms. |
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