GBIF Occurrence Download
A dataset containing 4271354 species occurrences available in GBIF matching the query: { "and" : [ "HasCoordinate is true", "TaxonKey is Proteobacteria", "HasGeospatialIssue is false" ] }. The dataset includes 4271354 records from 311 constituent datasets: 374...
| Main Author: | |
|---|---|
| Format: | Dataset |
| Language: | unknown |
| Published: |
The Global Biodiversity Information Facility
2019
|
| Subjects: | |
| Online Access: | https://dx.doi.org/10.15468/dl.0uhivz https://www.gbif.org/occurrence/download/0025852-190415153152247 |
| Summary: | A dataset containing 4271354 species occurrences available in GBIF matching the query: { "and" : [ "HasCoordinate is true", "TaxonKey is Proteobacteria", "HasGeospatialIssue is false" ] }. The dataset includes 4271354 records from 311 constituent datasets: 3746 records from International Collection of Microorganisms from Plants (ICMP). 7174 records from Baselines Initiative 16S rRNA gene dataset: Baselines Amplicon Release 1 (R1) Indian Ocean 2015. 17182 records from Comparative 16S analysis of hydrothermal vent samples from the Mid-Atlantic Ridge (MAR). 3713 records from Arctic first-year drift ice and under-ice water bacterial communities. 6461 records from Northern Gulf of Mexico Hypoxic Zone Raw sequence reads. 55803 records from Biological Impacts of Ocean Acidification. 7490 records from Microbial community structure and dynamics in the oxygen minimum zone of the Northeast subarctic Pacific Ocean. 3 records from Seasearch Marine Surveys in England. 548 records from Microbial Diversity in Antarctic marine sediments (Admiralty Bay and Bransfield Strait). 358 records from Microbial induced mineral precipitations caused by nitrate treatment for souring control during microbial enhanced oil recovery (MEOR). 2599 records from Trichodesmium spiralis associated microbiome Targeted loci. 3787 records from Vibrio-specific 16S rRNA sequences from seawater, sediment, and oyster hatchery samples. 18694 records from North Pacific Subtropical Gyre Microbial Community. 2340 records from Seawater Targeted Locus (Loci). 1 records from Metagenomic community analysis of marine zooplankton using two plankton nets. 73 records from SINGER Coordinator. 32292 records from Macroalgal Morphology affects composition and settlement of microbial communities. 8494 records from Microbial diversity in the Tongyeong-Geoje coastal area of Korea. 1107 records from Marine Water Column Samples Targeted loci environmental. 135 records from INVESTIGATING THE MICROBIAL EUKARYOTIC COMMUNITIES IN THE SURFACE WATERS OF THE ARAFURA SEA AND CORAL SEA. 4528 records from Microbial associations in temperate marine copepods from the Gulf of Maine. 5288 records from Bacterial communities from the water column and the surface sediments along a transect in the East Sea (Sea of Japan). 12 records from Ecología de comunidades microbianas en las aguas subterráneas de Cuatrociénegas, Coahuila. 12798 records from Marine metagenome Targeted loci environmental. 1813 records from Prokaryotic community response to microalgal lysates. 1 records from Phytoplankton Species Composition, Abundance and Cell Size in San Francisco Bay: Microscopic Analyses of USGS Samples Collected 1992-2014. 3 records from New Zealand Fungal and Plant Disease Collection (PDD). 3321 records from Diet analysis of Japanese sardine and Pacific round herring larvae. 109 records from uncultured marine eukaryote Targeted loci environmental. 22243 records from Bacterial Diversity in the East China Sea. 936 records from marine sediment metagenome Raw sequence reads. 13 records from Comparative study in validity of three regions of 18S-rRNA for eukaryote amplicon sequence analyses. 2330 records from Species-specific associations between bacterioplankton and photosynthetic picoeukaryotes. 18855 records from Impact of a major inflow event on the composition and distribution of bacterioplankton communities in the Baltic Sea. 93 records from Records of the DAFWA Plant Pathology Collection. 6477 records from Microbial community in marine sediments. 4749 records from Spirulina necromass degradartion in arctic marine sediments. 1577 records from Actualización de la Colección de Microorganismos de importancia acuática. 1182 records from Antarctic Snow Algae 2014/15 16S and 18S Illumina Seq of snow algae communities around Ryder Bay, Antarctica. 3656 records from Equatorial Pacific Ocean Targeted loci environmental. 602 records from suspended particulate matter Raw sequence reads. 179 records from CARBOM cruise 2013 flow cytometry sorted phytoplankton. 16 records from Collections of Phytoplankton at Herbarium Berolinense, Berlin (B). 59 records from European Molecular Biology Laboratory Australian Mirror. 38724 records from Bacteria exposure experiment North Sea. 5857 records from Microbial Processes and Biodiversity: OCEAN. 66720 records from EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods. 336 records from marine sediment metagenome Raw sequence reads. 80 records from Elaboración de la base de datos de la colección de cepas de bacterias fitopatógenas de la Dirección General de Sanidad Vegetal. 7 records from Lane 6 Analysis. 1 records from The cryptogamy collection (PC) at the Herbarium of the Muséum national d'Histoire Naturelle (MNHN - Paris). 4477 records from the assembly of abundant and rare bacterioplankton subcommunities in three subtropical bays. 1 records from NMNH Extant Specimen Records. 2890 records from Extracellular DNA marine sediment Targeted Locus (Loci). 18373 records from Reciprocal transplantation experiment of salt marsh sediments Targeted loci. 7626 records from IMPACT OF SAHARAN DUST DEPOSITION ON BACTERIOPLANKTON IN MARINE SURFACE WATER. 5243 records from CCA_pathobiome. 85 records from SAR amplicon from community incubated with various nanophytoplankton in microcosm. 31976 records from Little Sippewissett Marsh Targeted Locus (Loci). 517 records from Ocean sediment-basement interface Targeted Locus (Loci). 2 records from Questagame weekly feed. 2 records from Marine biological observation data from coastal and offshore surveys around New Zealand. 604 records from 3Soil16S. 3998 records from Standard filtration practices significantly distort planktonic microbial diversity estimates. 7440 records from Marine sediment Raw sequence reads. 2 records from HZI (GBF) Reichenbach Collection of Myxobacteria. 186 records from Soil DNA extracted from Robinson Ridge, East Antarctica Raw sequence reads. 4574 records from Bacterial diversity in snow from mid-latitude mountain areas: Alps, Eastern Anatolia, Karakoram and Himalaya.. 4 records from Mount Hope Bay bacteria Targeted Locus (Loci). 26168 records from Microbial diversity in the Benguela coastal upwelling system as derived from 16S rRNA sequencing and RNA Stable Isotope Probing (SIP). 5658 records from A practical introduction to microbial molecular ecology through the use of iChips. 25388 records from Bacterias y Arqueas de la transición Andino-Amazónica del departamento del Caquetá - Proyecto Colombia BIO. 1 records from Yarwun Port Curtis Sediment Bacterial 16S rRNA (V6) 454 sequence. 17969 records from Mariana and Kermadec Trench sediment 16S rRNA gene sequencing. 63 records from Dutch Foundation for Applied Water Research (STOWA) - Limnodata Neerlandica. 22953 records from ADDOMEx. 20343 records from Microbial diversity in the Tongyeong-Geoje coastal area of Korea2. 3854 records from Marine bacteria metagenome. 5 records from Queensland Museum provider for OZCAM. 9 records from Marine sites, habitats and species data collected during the BioMar survey of Ireland.. 1926 records from Submarine Ligurian Canyons Water Prokaryotic and Protist Communities. 36 records from Environmental zooplankton Targeted Locus (Loci). 16244 records from Mediterranean Contaminated Pelagic communities. 20556 records from ADDOMEx Tier 3 Experiments: Mesocosm Si with Gulf of Mexico coastal waters. 4046 records from 16S rRNA amplicon from marine Bacteria Raw sequence reads. 7 records from International Barcode of Life project (iBOL). 25 records from Biodiversidad microbiana de los ecosistemas marinos en la Isla Cayo Serrana durante la Expedición Seaflower 2016 - Proyecto Colombia BIO. 3 records from LNHG Biological Records Dataset. 46 records from 16S analysis (pyrosequencing), Hainich grassland VIPs 2008. 17117 records from Marine Sediment from the Berkeley Bay Targeted Locus (Loci). 4212 records from Hydrate Ridge, OR - Deep sea cold seep ecosystem Targeted Locus (Loci). 548 records from envinronment Metagenome. 414 records from marine Archaea metagenome. 5894 records from Pelagic Gulf of Mexico Targeted loci environmental. 1017 records from Shotgun Metagenomic Sequencing of the Arctic Ocean during Winter-Spring Transition. 558 records from VAG Mine Pit Pond Metagenome. 2 records from Collections and observation data National Museum of Natural History Luxembourg. 9369 records from Gulf of Mexico open ocean Targeted Locus (Loci). 8424 records from 16S amplicons Subtropical Frontal Zone New Zealand. 735 records from Comparison of copper contaminated soils, with similar uncontaminated controls.. 83 records from Cepario del Laboratorio de Microbiología y Mutagénesis Ambiental de la UIS (LMMA). 1849 records from Sea water microorganisms Raw sequence reads. 3309 records from Taxonomic study of endospores in a marine sediment. 7238 records from 16S data describing Antarctic benthic sediment. 229 records from California Current Cruise CCE-P1408 Process Cruise #6. 749 records from Northern Gulf of Mexico Hypoxia can Alter Sediment Communities of Nitrifying Archaea. 369 records from ocean bacteria Metagenomic assembly. 6269 records from Diversity of bacterioneuston and bacterioplankton in coastal waters of Misaki, Japan. 9 records from Marine sites, habitats and species data collected during the BioMar survey of Ireland.. 27205 records from Nutrient addition mesocosm experiment Targeted Locus (Loci). 156 records from Eukaryotic natural population from Northern Baffin Bay - Raw sequence reads. 22312 records from Marine methane seep Targeted Locus (Loci). 1 records from South American Antarctic Marine Biodiversity Literature. 2204 records from 15N methylamine SIP (WCO station L4). 84951 records from Zostera Marina Ammonification environmental. 15 records from Blue Mountains Swamp Archaea. 1 records from Fungal Records Database of Britain and Ireland. 2505 records from Biogeography of pelagic bacterioplankton across an antagonistic temperature-salinity gradient in the Red Sea. 2 records from Archaea Arctic Ocean Survey Targeted Locus (Loci). 51041 records from Bacterial 16s Amplicon Sequencing of the Atlantic Ocean. 68032 records from Geographically tagged INSDC sequences. 75 records from 16S rRNA gene (V2-V3 region) based analysis of soil procaryotic community composition, Alb VIPs 2008. 44 records from Marine metagenome ICM_AWP. 1 records from University of Tennessee Fungal Herbarium. 1 records from Gothenburg Herbarium - General (GBIF:IH:GB:Herbarium). 58 records from Microbial eukaryotes. 10982 records from Temporal dynamics of the particle-attached and free-living microbial communities from coastal seawater. 3239 records from Microbial communities in marine surface water. 27 records from Marine sediment metagenome ICM_FIS. 12957 records from Abundance, diversity and distribution of Legionellales in wet environments in Sweden. 1516 records from Diet analysis of Pacific Bluefin Tuna larvae. 4 records from Diversity of algae in wetlands. 83 records from Species data for Scottish waters held and managed by Scottish Natural Heritage, derived from benthic surveys 1993 to 2014. 14699 records from Sea spray aerosols at Three California Beaches. 34 records from Diesel contamination of Antarctic soils and sediments. 26 records from Marine sediment metagenome ICM_NZS. 1457 records from Ocean Acidification baceria sample Targeted loci environmental. 890 records from Southern Ocean. 48 records from Global Ocean Sampling Expedition. 1 records from Lund Botanical Museum (LD). 9224 records from Effect of genetics and environment on gut bacteria in Anopheles and Aedes mosquitoes.. 1 records from CONN. 1 records from Natural History Museum (London) Collection Specimens. 552 records from Marine metagenome ICM_JRV. 1984 records from E1 Targeted Locus (Loci). 2 records from Seasearch Marine Surveys in Wales. 5870 records from Caspian Sea Sediment - 16S Survey Targeted Locus (Loci). 55295 records from DEEPEND: Microbiome and bacterioplankton rRNA gene sequence data collected from Gulf of Mexico seawater samples. Cruises DP03 and DP04 from Jan 2016 - December 2016. 29 records from Microorganismos asociados con la filósfera de plantas de Espeletia en el PNN los Nevados. 19272 records from Short-term interaction of pyrene and cadmium in prokaryotic community in coastal sediment microcosms. 1554 records from Bacterial community dynamics during polysaccharide degradation at contrasting sites in the Southern and Atlantic Oceans. 413184 records from Nahant Collection. 13150 records from US East Coast Salt Marshes Targeted Locus (Loci). 6636 records from aquatic bacterial metagenome Raw sequence reads. 6 records from Mediterranean Bathypelagic Habitat. 367 records from rDNA amplicon sequencing of Western North Atlantic microbial community. 1 records from Paleobiology Database. 4 records from Marine sediment metagenome ICM_GMS. 7502 records from Variations in prokaryotic community assembly and predicted metabolic potential of surface sediments with geography in the coastal northern Zhejiang, East China Sea. 4 records from IndOBIS, Indian Ocean Node of OBIS. 4889 records from Zooplankton communities in the coastal water of northeastern Hokkaido. 157 records from Proyecto para compatibilizar el inventario de biota edáfica BGBD con el Sistema Nacional de Información sobre Biodiversidad. 1483 records from CTD water column metabarcoding. 1 records from Diversity, Ecology and Biogeochemistry of cyst-forming acantharia (Radiolaria) in the oceans. 4920 records from marine sediment metagenome Raw sequence reads. 5215 records from Intertidal Mixing Zone Targeted Locus (Loci). 216 records from Metagenomic sequence from soil bacteria. 14429 records from Effects of Fecal Input, Environmental Conditions, and Environmental Sources on Enterococci Concentrations in an Estuarine Ecosystem. 6 records from Marine Biological Sample Database, JAMSTEC. 2 records from Rotherham Biological Records Centre - Non-sensitive Records from all taxonomic groups. 206 records from Biodiversidad de grupos funcionales de microorganismos en el Parque Nacional Natural de Los Nevados, Colombia. 1 records from Kosrae Invasive Database. 1 records from BoBO - Botanic Garden and Botanical Museum Berlin Observations. 1151 records from Metagenome data from DNA stable isotope probing of Stiffkey saltmarsh sediment microcosms to investigate methanogenesis from choline. 7336 records from Patagonian fjord prokaryote community. 2585 records from water Raw sequence reads. 178 records from A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes. 11 records from Amundsen Gulf Overwintering Eukaryote Community. 87 records from The Myxomycetes Collections at the Botanische Staatssammlung München - Collection of Martin Schnittler. 1050 records from A study on microbial functional groups producing a climate related gas in the ocean. 98 records from Anammox bacteria in sediment cores of Daya Bay, China. 34 records from naturgucker. 2 records from Paleobiology Database. 4921 records from Bacteria in domestic water-storage containers with or without mosquito larvae. 4886 records from Microbiome profiling Schlöppnerbrunnen peat cores from different depths. 4283 records from Community structure of Archaea in the western North Pacific and the Arctic Ocean. 2853 records from marine sediment metagenome Targeted loci environmental. 786 records from Distinctive community structure and high diversity in particle-associated prokaryotes in tropical and subtropical Pacific Ocean surface seawater. 1 records from Asia-Pacific Dataset. 11 records from Diversity and structure of benthic bacterial community from South-Eastern Pacific Ocean, Targeted Locus (Loci). 31 records from iNaturalist Research-grade Observations. 500 records from DSMZ Prokarya Collection Catalogue. 4362 records from Santa Monica Basin seep sediment incubations to assess C and N sources for F430 synthesis. 1186 records from Whale fall. 537 records from Microbial diversity of marine sediments from Ross Sea. 5 records from Cercle des mycologues de Montréal Fungarium (CMMF). 13354 records from Seasonal and spatial diversity of bacterial communities in marine sediments of Ningbo Xiangshan Coastal Ocean. 488 records from Microbial diversity associated with copepods in the North Atlantic subtropical gyre. 1805 records from Bacterial diversity in the South Adriatic Sea during winter of 2016. 3190 records from marine sediment metagenome Raw sequence reads. 40 records from Archaea diversity in marine sediment. 27321 records from Polymetallic nodule field Targeted loci environmental. 1 records from Solomon Islands Invasive Species Database. 9548 records from Po river Prodelta and Mar Piccolo of Taranto surface sediments bacterial communities targeted loci. 8104 records from eDNA_Subseafloor. 126 records from The System-wide Information Network for Genetic Resources (SINGER). 6904 records from Abyssal Baseline Study & Geophysical Survey (ABYSSLINE 02)_AB01_Re-sequenced Targeted loci environmental. 1 records from CSIC-Real Jardín Botánico-Colección de Hongos (MA-Fungi). 2088 records from Marine methane seep Targeted Locus (Loci). 2236 records from marine sediment metagenome Metagenome. 41 records from Anammox bacteria in surface sediments of South China Sea. 408 records from UK coast natural seawater Genome sequencing. 4713 records from Incubation of marine methane seep sediments with a bioorthogonal amino acid. 22 records from CFU of pink-pigmented facultative methylotrophs per gramm leaf fresh weight. 3 records from Monitoring data from the federal state Saxony (Germany). 11372 records from Queensland Marine Sediment. 815 records from gas hydrate bearing sediment Raw sequence reads. 52169 records from Microbial community structure is affected by cropping sequences and bio-covers under long-term no-tillage. 143 records from Estudio de la microflora de los suelos de la zona de preservación ecológica 'La Uva' (Sinaloa) con vegetación de selva baja caducifolia empleando taxonomía molecular. 3682 records from Xylophaga in situ Eclusion Experiment. 72 records from Marine metagenome ICM_LCR. 4138 records from marine metagenome Raw sequence reads. 57087 records from Effects of organic matter manipulation on archaeal, bacterial, and fungal community assembly. 1826 records from Microbial communities associated with ferromanganese nodules and the surrounding sediments. 2 records from Marine flora and fauna records from the North-east Atlantic. 1 records from Brown University Herbarium. 22 records from DGGE profiles of selected Alphaproteobacteria from leaf samples. 3811 records from photoautotrophic_biofilm. 4630 records from Sea water sample Targeted Locus (Loci). 1 records from Natusfera Citizen Science Observation Dataset. 6139 records from Bacterial 16S rRNA gene sequencing of Antarctic soil. 2 records from Fungus Collections at Staatliches Museum für Naturkunde Karlsruhe (Herbarium KR). 2420 records from Atlantic salmon microbiota. 492 records from Water and Sediment samples Targeted loci environmental. 1599 records from Microbial indicators of anthropogenic marine pollution identified by 16S and 18S metagenomic library analysis. 16016 records from Microbial diversity in the Tongyeong-Geoje coastal area of Korea. 10 records from nifH diversity in the North Pacific Ocean. 1036 records from dsrB sequencing of sulfate-reducing microbial communities in Skagerrak and Baltic sediment. 4 records from Sea Education Association Sargasso Sea Cruise C247 May 2013. 16 records from Seasearch Marine Surveys in Scotland. 133653 records from Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.. 80171 records from Coral. 5 records from Miscellaneous records held by BIS. 9685 records from Microbial Biogeography and Potential Ecological Function Deep Indian Ocean Ridge. 3897 records from Comparison of marine sediments from the Beguela upwelling zone. 30448 records from 16S Amplicon Data from an Antarctic Cold Seep. 1 records from Marine data from Natural Resources Wales (NRW) Technical Support (Research & Monitoring) Contracts, Wales. 31 records from Bacterias y Actinobacterias aisladas del PNN los Nevados para estudios de actividad antimicriobana. 14529 records from Meta_Kosmos. 6204 records from Coastal seawater influenced by the municipal effluents Raw sequence reads. 16 records from Antarctic Marine Bacteria from Denmark University. 19 records from White sea picoplankton Metagenome. 7 records from Type Localities for organisms and fossils first described from Antarctica. 2190 records from Baltic Sea. 6680 records from A long-standing complex tropical dipole shapes marine microbial biogeography. 4 records from Canadian Museum of Nature Parasite Collection. 2 records from All taxa records for Leicestershire and Rutland between 1987 and 2016. 90 records from VIP_data_topsoil_jointsampling_microbiolgroups_2008_Heiko_Nacke. 180 records from Marine Nature Conservation Review (MNCR) and associated benthic marine data held and managed by JNCC. 337 records from Agents pathogènes responsables de maladies traitées à l'Hôpital de Mènontin (Cotonou, Sud-Bénin). 13058 records from marine sediment metagenome Metagenome. 1001 records from BrdU_MAB_SS Metagenome. 15256 records from Biological rejuvenation of iron oxides in bioturbated marine sediments. 1 records from Slovenian Fungal Database - Boletus informaticus. 3765 records from Amplicon sequencing of Tara Oceans RNA samples corresponding to size fractions for protists.. 592 records from Distributions and Abundances of Sublineages of the N2-Fixing Cyanobacterium Candidatus Atelocyanobacterium thalassa (UCYN-A) in the Noumea Lagoon. 8132 records from Life in a toxic environment. 22 records from DGGE profiles of selected Gammaproteobacteria from leaf samples. 1 records from uncultured marine picoeukaryote strain:Peuk_V4_NWP1 Raw sequence reads. 10 records from Database on Forest Disturbances in Europe. 361512 records from MICROBIS database. 11 records from Marine metagenome ICM_VAG. 482 records from Ocean crust Targeted Locus (Loci). 42474 records from Sediment surface microbial community changes due to phytoplankton addition. 1537 records from marine metagenome Targeted Locus (Loci). 1 records from ALA species sightings and OzAtlas. 4230 records from Global Malaspina 2010 deep ocean expedition - rRNA pyrotags. 400 records from Marine subseafloor sediment Targeted Locus (Loci). 5880 records from Cascading influence of inorganic nitrogen sources on DOM production composition lability and microbial community structure in the open ocean. 2037 records from peptide incubation in GOM C6 seawater bacteria Metagenome. 24937 records from marine sediment metagenome Targeted loci environmental. 1467181 records from Marine metagenomes Metagenome. 26 records from Complete list of isolated phyllosphere Methylobacterium strains. 11119 records from Nuunat- ORMS formation during oil biodegradation at low temperature. 1231 records from Red Sea Zooplankton Raw sequence reads. 2149 records from Diversity of archaeal and bacterial 16S rRNA gene in marine sediment in Aarhus Bay. 10297 records from Red Sea microbial plankton Raw sequence reads. 247 records from De novo whole metagenome sequencing studies. 41738 records from Development and validation of a multi-trophic metabarcoding biotic index for benthic organic enrichment biomonitoring using a salmon farm case-study.. 3438 records from Thermophilic endospores in temperate sediments. 18914 records from Bacterial Biogeography of Coastal Water in the Northern East China Sea. 728 records from Nitrate-storing microorganisms in sediments of the Bornholm Basin. 88 records from Research on Airborne Ice Nucleating Species. 4935 records from 16S_Sediment_Bolinao. 17374 records from Heterogeneity of methane seep microbiomes in the NE Pacific. 1096 records from Mediterranean mud volcano flow Targeted loci. 35260 records from SCHEMA_Sediment. 2590 records from South China Sea interfaces 16S amplicon sequencing. 417 records from Marine metagenome ICM_GPS. 2990 records from Distribution of the Roseobacter clade. 497 records from Microbial diversity studies of Arabian Sea sediment. 3003 records from Dark ocean microbial diversity. 12 records from MEL AVH data. 828 records from Sediment Metagenome. 1449 records from Metagenomes of Sediments from Red Sea Atlantis II and Discovery Deep Brine Pools. 1642 records from Metagenomic investigation of six depths from the anchialine Bundera sinkhole. 2497 records from DDCA-metagenome. 7916 records from marine sediment metagenome Targeted loci environmental. 260 records from Occurrences in SinBIOTA. 5516 records from Sediment bacteria in the Southern Ocean. 646 records from Prospecting of extreme microbial ecosystems associated to minerals (microbialites, microbial mats and endoevaporites) in Puna, Wetlands and Salars of Argentina, Chile and Bolivia. Data from some individual datasets included in this download may be licensed under less restrictive terms. |
|---|