DNA metabarcoding of the prey and microbiome of museum specimen Antarctic trematomid fishes ...

In this dataset, stomachs and hindguts were sampled from 225 Trematomus specimens from the Natural History Museum London. Fish specimen were collected between 20 and 100 years ago and fixed in either formaldehyde or ethanol. A 313 bp fragment of the cytochrome c oxidase subunit I (COI) was amplified...

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Bibliographic Details
Main Authors: Heindler, Franz, Christiansen, Henrik, Frédérich, Bruno, Dettaï, Agnes, Lepoint, Gilles, Putte, Anton Van De, Volckaert, Filip
Format: Dataset
Language:English
Published: SCAR - Microbial Antarctic Resource System 2020
Subjects:
Samplingevent
Antarctic
Antarc*
Online Access:https://dx.doi.org/10.15468/5axtcc
https://www.gbif.org/dataset/ccba820a-bc62-4cf4-85f2-e0a991efcc6c
Description
Summary:In this dataset, stomachs and hindguts were sampled from 225 Trematomus specimens from the Natural History Museum London. Fish specimen were collected between 20 and 100 years ago and fixed in either formaldehyde or ethanol. A 313 bp fragment of the cytochrome c oxidase subunit I (COI) was amplified and sequenced for prey item identification in the stomach and a 450 bp region of the 16S rRNA gene to investigate microbiome composition in the gut system. ...

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