Comprehensive proteomic study of the antiproliferative activity of a polyphenol-enriched rosemary extract on colon cancer cells using nanoliquid chromatography-orbitrap MS/MS

In this work, a proteomics strategy based on nanoliquid chromatography-tandem mass spectrometry (nano-LC-MS/MS) using an Orbitrap high-resolution mass spectrometer together with stable isotope dimethyl labeling (DML) is applied to quantitatively examine relative changes in the protein fraction of HT...

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Published in:Journal of Proteome Research
Main Authors: Valdés, Alberto, Bergquist, Jonas, García-Cañas, Virginia, Cifuentes, Alejandro
Other Authors: Swedish Research Council, Ministerio de Economía y Competitividad (España), Comunidad de Madrid
Format: Article in Journal/Newspaper
Language:unknown
Published: American Chemical Society 2016
Subjects:
DML
Online Access:http://hdl.handle.net/10261/150109
https://doi.org/10.1021/acs.jproteome.6b00154
https://doi.org/10.13039/501100003329
https://doi.org/10.13039/100012818
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spelling ftcsic:oai:digital.csic.es:10261/150109 2024-02-11T10:03:23+01:00 Comprehensive proteomic study of the antiproliferative activity of a polyphenol-enriched rosemary extract on colon cancer cells using nanoliquid chromatography-orbitrap MS/MS Valdés, Alberto Bergquist, Jonas García-Cañas, Virginia Cifuentes, Alejandro Swedish Research Council Ministerio de Economía y Competitividad (España) Comunidad de Madrid 2016 http://hdl.handle.net/10261/150109 https://doi.org/10.1021/acs.jproteome.6b00154 https://doi.org/10.13039/501100003329 https://doi.org/10.13039/100012818 unknown American Chemical Society #PLACEHOLDER_PARENT_METADATA_VALUE# info:eu-repo/grantAgreement/MINECO/Plan Estatal de Investigación Científica y Técnica y de Innovación 2013-2016/AGL2014-53609-P S2013/ABI-2728/ALIBIRD-CM Sí doi:10.1021/acs.jproteome.6b00154 e-issn: 1535-3907 issn: 1535-3893 Journal of Proteome Research 15(6): 1971-1985 (2016) http://hdl.handle.net/10261/150109 http://dx.doi.org/10.13039/501100003329 http://dx.doi.org/10.13039/100012818 none Rosemary extract Antiproliferative activity Quantitative proteomics Mass spectrometry HT-29 cells Colon cancer Dimethyl labeling Foodomics artículo http://purl.org/coar/resource_type/c_6501 2016 ftcsic https://doi.org/10.1021/acs.jproteome.6b0015410.13039/50110000332910.13039/100012818 2024-01-16T10:23:19Z In this work, a proteomics strategy based on nanoliquid chromatography-tandem mass spectrometry (nano-LC-MS/MS) using an Orbitrap high-resolution mass spectrometer together with stable isotope dimethyl labeling (DML) is applied to quantitatively examine relative changes in the protein fraction of HT-29 human colon cancer cells treated with different concentrations of a polyphenol-enriched rosemary extract over the time. The major objective of this study was to gain insights into the antiproliferative mechanisms induced by rosemary polyphenols. Using this methodology, 1909 and 698 proteins were identified and quantified in cell extracts. The polyphenol-enriched rosemary extract treatment changed the expression of several proteins in a time- and concentration-dependent manner. Most of the altered proteins are implicated in the activation of Nrf2 transcription factor and the unfolded protein response. In conclusion, rosemary polyphenols induced proteomic changes that were related to the attenuation of aggresome formation and activation of autophagy to alleviate cellular stress. This work was supported by the projects AGL2014-53609-P (Ministerio de Economia y Competitividad, Spain) and S2013/ABI-2728 (Comunidad de Madrid). A.V. thanks the Ministerio de Economia y Competitividad for his FPI predoctoral fellowship (BES-2012-057014). The Swedish Research Council (2011-4423 and 2015-4870; J.B.) is acknowledged for financial support. Peer Reviewed Article in Journal/Newspaper DML Digital.CSIC (Spanish National Research Council) Journal of Proteome Research 15 6 1971 1985
institution Open Polar
collection Digital.CSIC (Spanish National Research Council)
op_collection_id ftcsic
language unknown
topic Rosemary extract
Antiproliferative activity
Quantitative proteomics
Mass spectrometry
HT-29 cells
Colon cancer
Dimethyl labeling
Foodomics
spellingShingle Rosemary extract
Antiproliferative activity
Quantitative proteomics
Mass spectrometry
HT-29 cells
Colon cancer
Dimethyl labeling
Foodomics
Valdés, Alberto
Bergquist, Jonas
García-Cañas, Virginia
Cifuentes, Alejandro
Comprehensive proteomic study of the antiproliferative activity of a polyphenol-enriched rosemary extract on colon cancer cells using nanoliquid chromatography-orbitrap MS/MS
topic_facet Rosemary extract
Antiproliferative activity
Quantitative proteomics
Mass spectrometry
HT-29 cells
Colon cancer
Dimethyl labeling
Foodomics
description In this work, a proteomics strategy based on nanoliquid chromatography-tandem mass spectrometry (nano-LC-MS/MS) using an Orbitrap high-resolution mass spectrometer together with stable isotope dimethyl labeling (DML) is applied to quantitatively examine relative changes in the protein fraction of HT-29 human colon cancer cells treated with different concentrations of a polyphenol-enriched rosemary extract over the time. The major objective of this study was to gain insights into the antiproliferative mechanisms induced by rosemary polyphenols. Using this methodology, 1909 and 698 proteins were identified and quantified in cell extracts. The polyphenol-enriched rosemary extract treatment changed the expression of several proteins in a time- and concentration-dependent manner. Most of the altered proteins are implicated in the activation of Nrf2 transcription factor and the unfolded protein response. In conclusion, rosemary polyphenols induced proteomic changes that were related to the attenuation of aggresome formation and activation of autophagy to alleviate cellular stress. This work was supported by the projects AGL2014-53609-P (Ministerio de Economia y Competitividad, Spain) and S2013/ABI-2728 (Comunidad de Madrid). A.V. thanks the Ministerio de Economia y Competitividad for his FPI predoctoral fellowship (BES-2012-057014). The Swedish Research Council (2011-4423 and 2015-4870; J.B.) is acknowledged for financial support. Peer Reviewed
author2 Swedish Research Council
Ministerio de Economía y Competitividad (España)
Comunidad de Madrid
format Article in Journal/Newspaper
author Valdés, Alberto
Bergquist, Jonas
García-Cañas, Virginia
Cifuentes, Alejandro
author_facet Valdés, Alberto
Bergquist, Jonas
García-Cañas, Virginia
Cifuentes, Alejandro
author_sort Valdés, Alberto
title Comprehensive proteomic study of the antiproliferative activity of a polyphenol-enriched rosemary extract on colon cancer cells using nanoliquid chromatography-orbitrap MS/MS
title_short Comprehensive proteomic study of the antiproliferative activity of a polyphenol-enriched rosemary extract on colon cancer cells using nanoliquid chromatography-orbitrap MS/MS
title_full Comprehensive proteomic study of the antiproliferative activity of a polyphenol-enriched rosemary extract on colon cancer cells using nanoliquid chromatography-orbitrap MS/MS
title_fullStr Comprehensive proteomic study of the antiproliferative activity of a polyphenol-enriched rosemary extract on colon cancer cells using nanoliquid chromatography-orbitrap MS/MS
title_full_unstemmed Comprehensive proteomic study of the antiproliferative activity of a polyphenol-enriched rosemary extract on colon cancer cells using nanoliquid chromatography-orbitrap MS/MS
title_sort comprehensive proteomic study of the antiproliferative activity of a polyphenol-enriched rosemary extract on colon cancer cells using nanoliquid chromatography-orbitrap ms/ms
publisher American Chemical Society
publishDate 2016
url http://hdl.handle.net/10261/150109
https://doi.org/10.1021/acs.jproteome.6b00154
https://doi.org/10.13039/501100003329
https://doi.org/10.13039/100012818
genre DML
genre_facet DML
op_relation #PLACEHOLDER_PARENT_METADATA_VALUE#
info:eu-repo/grantAgreement/MINECO/Plan Estatal de Investigación Científica y Técnica y de Innovación 2013-2016/AGL2014-53609-P
S2013/ABI-2728/ALIBIRD-CM

doi:10.1021/acs.jproteome.6b00154
e-issn: 1535-3907
issn: 1535-3893
Journal of Proteome Research 15(6): 1971-1985 (2016)
http://hdl.handle.net/10261/150109
http://dx.doi.org/10.13039/501100003329
http://dx.doi.org/10.13039/100012818
op_rights none
op_doi https://doi.org/10.1021/acs.jproteome.6b0015410.13039/50110000332910.13039/100012818
container_title Journal of Proteome Research
container_volume 15
container_issue 6
container_start_page 1971
op_container_end_page 1985
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