Phylogeographic patterns of Deschampsia cespitosa (Poaceae) in Europe inferred from genomic data
The highly variable tufted hairgrass Deschampsia cespitosa is a tussock-forming plant especially of cool and humid environments. Although common and widespread, its phylogeographic structure and the significance of polyploidy for its evolution are poorly understood. Here we used a phylogenomic appro...
Published in: | Botanical Journal of the Linnean Society |
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Main Authors: | , , , , , , , , , |
Format: | Article in Journal/Newspaper |
Language: | English |
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Online Access: | http://hdl.handle.net/11336/233711 |
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author | Xue, Zhiqing Chiapella, Jorge Oscar Paun, Ovidiu Volkova, Polina Peintinger, Markus Wasowicz, Pawel Tikhomirov, Nikita Grigoryan, Maksim Barfuss, Michael H. J. Greimler, Josef |
author_facet | Xue, Zhiqing Chiapella, Jorge Oscar Paun, Ovidiu Volkova, Polina Peintinger, Markus Wasowicz, Pawel Tikhomirov, Nikita Grigoryan, Maksim Barfuss, Michael H. J. Greimler, Josef |
author_sort | Xue, Zhiqing |
collection | CONICET Digital (Consejo Nacional de Investigaciones Científicas y Técnicas) |
container_issue | 3 |
container_start_page | 341 |
container_title | Botanical Journal of the Linnean Society |
container_volume | 201 |
description | The highly variable tufted hairgrass Deschampsia cespitosa is a tussock-forming plant especially of cool and humid environments. Although common and widespread, its phylogeographic structure and the significance of polyploidy for its evolution are poorly understood. Here we used a phylogenomic approach to study the genetic structure of this species in Europe and how the polyploid cytotypes/subspecies are related to the diploids. Using genomic data (RADseq and wholeplastid sequencing) we found a highly divergent Iberian group, including the Spanish Deschampsia cespitosa subsp. cespitosa (diploid and tetraploid) and the Macaronesian island endemic diploid Deschampsia argentea. Moreover, we found substantial divergence of pseudoviviparous tetraploids (Deschampsia cespitosa subspp. neoalpina and rhenana) from seminiferous tetraploids (except Deschampsia cespitosa subsp. littoralis) and all diploids of the remainingEuropean samples. The divergent pseudoviviparous tetraploids (D. cespitosa subspp. neoalpina and rhenana) and the seminiferous tetraploid D. cespitosa subsp. littoralis probably represent periglacial and relict lineages of unknown origin regarding auto- and/or allo-polyploidy, whereas other seminiferous tetraploid variants of D. cespitosa are always nested in the diploid D. cespitosa, suggesting multiple autopolyploid origins. An analysis after excluding the IberianGroup and the highly divergent tetraploids revealed five genetic groups with overlapping geographical patterns. However, the recovered geographical structure, the overall low genetic divergence and the diffuse genetic structure point to recolonization from various refugial areas and secondary contact. Effective wind dispersal of pollen and seeds in an open early post-glacial tundra landscape and, finally, increasing human impact on dispersal of this grass since theNeolithic, may have enhanced admixture and resulted in the complex patterns detected today. Fil: Xue, Zhiqing. Universidad de Viena. Instituto de Botanica; Austria Fil: Chiapella, ... |
format | Article in Journal/Newspaper |
genre | Tundra |
genre_facet | Tundra |
geographic | Allo |
geographic_facet | Allo |
id | ftconicet:oai:ri.conicet.gov.ar:11336/233711 |
institution | Open Polar |
language | English |
long_lat | ENVELOPE(-61.800,-61.800,-63.967,-63.967) |
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op_doi | https://doi.org/10.1093/botlinnean/boac067 |
op_relation | info:eu-repo/semantics/altIdentifier/url/https://academic.oup.com/botlinnean/article/201/3/341/6998521 info:eu-repo/semantics/altIdentifier/doi/10.1093/botlinnean/boac067 http://hdl.handle.net/11336/233711 CONICET Digital CONICET |
op_rights | info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ |
publisher | Wiley Blackwell Publishing, Inc |
record_format | openpolar |
spelling | ftconicet:oai:ri.conicet.gov.ar:11336/233711 2025-01-17T01:12:29+00:00 Phylogeographic patterns of Deschampsia cespitosa (Poaceae) in Europe inferred from genomic data Xue, Zhiqing Chiapella, Jorge Oscar Paun, Ovidiu Volkova, Polina Peintinger, Markus Wasowicz, Pawel Tikhomirov, Nikita Grigoryan, Maksim Barfuss, Michael H. J. Greimler, Josef application/pdf http://hdl.handle.net/11336/233711 eng eng Wiley Blackwell Publishing, Inc info:eu-repo/semantics/altIdentifier/url/https://academic.oup.com/botlinnean/article/201/3/341/6998521 info:eu-repo/semantics/altIdentifier/doi/10.1093/botlinnean/boac067 http://hdl.handle.net/11336/233711 CONICET Digital CONICET info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ ALLOPOLYPLOIDY AUTOPOLYPLOIDY DIPLOIDS GENOMIC STRUCTURE https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1 info:eu-repo/semantics/article info:ar-repo/semantics/artículo info:eu-repo/semantics/publishedVersion ftconicet https://doi.org/10.1093/botlinnean/boac067 2024-10-04T09:34:03Z The highly variable tufted hairgrass Deschampsia cespitosa is a tussock-forming plant especially of cool and humid environments. Although common and widespread, its phylogeographic structure and the significance of polyploidy for its evolution are poorly understood. Here we used a phylogenomic approach to study the genetic structure of this species in Europe and how the polyploid cytotypes/subspecies are related to the diploids. Using genomic data (RADseq and wholeplastid sequencing) we found a highly divergent Iberian group, including the Spanish Deschampsia cespitosa subsp. cespitosa (diploid and tetraploid) and the Macaronesian island endemic diploid Deschampsia argentea. Moreover, we found substantial divergence of pseudoviviparous tetraploids (Deschampsia cespitosa subspp. neoalpina and rhenana) from seminiferous tetraploids (except Deschampsia cespitosa subsp. littoralis) and all diploids of the remainingEuropean samples. The divergent pseudoviviparous tetraploids (D. cespitosa subspp. neoalpina and rhenana) and the seminiferous tetraploid D. cespitosa subsp. littoralis probably represent periglacial and relict lineages of unknown origin regarding auto- and/or allo-polyploidy, whereas other seminiferous tetraploid variants of D. cespitosa are always nested in the diploid D. cespitosa, suggesting multiple autopolyploid origins. An analysis after excluding the IberianGroup and the highly divergent tetraploids revealed five genetic groups with overlapping geographical patterns. However, the recovered geographical structure, the overall low genetic divergence and the diffuse genetic structure point to recolonization from various refugial areas and secondary contact. Effective wind dispersal of pollen and seeds in an open early post-glacial tundra landscape and, finally, increasing human impact on dispersal of this grass since theNeolithic, may have enhanced admixture and resulted in the complex patterns detected today. Fil: Xue, Zhiqing. Universidad de Viena. Instituto de Botanica; Austria Fil: Chiapella, ... Article in Journal/Newspaper Tundra CONICET Digital (Consejo Nacional de Investigaciones Científicas y Técnicas) Allo ENVELOPE(-61.800,-61.800,-63.967,-63.967) Botanical Journal of the Linnean Society 201 3 341 360 |
spellingShingle | ALLOPOLYPLOIDY AUTOPOLYPLOIDY DIPLOIDS GENOMIC STRUCTURE https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1 Xue, Zhiqing Chiapella, Jorge Oscar Paun, Ovidiu Volkova, Polina Peintinger, Markus Wasowicz, Pawel Tikhomirov, Nikita Grigoryan, Maksim Barfuss, Michael H. J. Greimler, Josef Phylogeographic patterns of Deschampsia cespitosa (Poaceae) in Europe inferred from genomic data |
title | Phylogeographic patterns of Deschampsia cespitosa (Poaceae) in Europe inferred from genomic data |
title_full | Phylogeographic patterns of Deschampsia cespitosa (Poaceae) in Europe inferred from genomic data |
title_fullStr | Phylogeographic patterns of Deschampsia cespitosa (Poaceae) in Europe inferred from genomic data |
title_full_unstemmed | Phylogeographic patterns of Deschampsia cespitosa (Poaceae) in Europe inferred from genomic data |
title_short | Phylogeographic patterns of Deschampsia cespitosa (Poaceae) in Europe inferred from genomic data |
title_sort | phylogeographic patterns of deschampsia cespitosa (poaceae) in europe inferred from genomic data |
topic | ALLOPOLYPLOIDY AUTOPOLYPLOIDY DIPLOIDS GENOMIC STRUCTURE https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1 |
topic_facet | ALLOPOLYPLOIDY AUTOPOLYPLOIDY DIPLOIDS GENOMIC STRUCTURE https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1 |
url | http://hdl.handle.net/11336/233711 |