SNP dataset for the springtail Hypogastrura viatica

Dataset of 7275 genome-wide Single Nucleotide Polymorphisms for the springtail Hypogastrura viatica in VCF format. An excel spreadsheet with associated metadata (sample collection details) is also supplied. The SNPs were generated at Diversity Arrays Technology (Canberra, Australia) using reduced re...

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Bibliographic Details
Format: Dataset
Language:unknown
Published: Monash University
Subjects:
Springtail
Collembola
SNP
genomic
population genetics
Invasive Species
island biogeographic patterns
phylogeography
sub-Antarctic island
Antarctic
Antarc*
Online Access:https://doi.org/10.26180/5d6f35ed1e4f7
https://researchdata.ands.org.au/snp-dataset-springtail-hypogastrura-viatica/1431573
https://figshare.com/authors/_/6058703
https://figshare.com/authors/_/756217
https://figshare.com/authors/_/3296265
https://figshare.com/authors/_/6636350
Description
Summary:Dataset of 7275 genome-wide Single Nucleotide Polymorphisms for the springtail Hypogastrura viatica in VCF format. An excel spreadsheet with associated metadata (sample collection details) is also supplied. The SNPs were generated at Diversity Arrays Technology (Canberra, Australia) using reduced representation next-generation sequencing, and subsequently quality filtered according to the methods outlined in the associated manuscript: Baird, H.P., Moon, K.L., Janion-Scheepers, C. & Chown, S.L. (2020) Springtail phylogeography highlights biosecurity risks of repeated invasions and intraregional transfers among remote islands. Evolutionary Applications, doi:10.1111/eva.12913

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