Conservation of known vertebrate cyclooxygenase functional domains and residues, from Havird et al (2015) J Mol Evol., Table 3 (Antarctic Inverts project)

<p>This dataset was published as Table 3 from Havird et al (2015). It contains a list of mostly invertebrate taxa and whether or not they possess&nbsp;known vertebrate cyclooxygenase functional domains and residues.</p> <p>Notes:<br /> - AA residue: based on sheep COX-1 n...

Full description

Bibliographic Details
Main Authors: Kenneth M. Halanych, Andrew Mahon
Format: Dataset
Language:unknown
Published: Biological and Chemical Oceanography Data Management Office (BCO-DMO) 2016
Subjects:
Online Access:https://search.dataone.org/view/sha256:58a1f63164b0c1f9222bed53f80cdc736cfa6498c0f018c264df7f41941c670e
Description
Summary:<p>This dataset was published as Table 3 from Havird et al (2015). It contains a list of mostly invertebrate taxa and whether or not they possess&nbsp;known vertebrate cyclooxygenase functional domains and residues.</p> <p>Notes:<br /> - AA residue: based on sheep COX-1 numbering (GenBank accession# <a href=\"https://www.ncbi.nlm.nih.gov/protein/NP_001009476\" target=\"_blank\">NP_001009476</a>)<br /> - Many features in Brachiopoda are unknown (?) due to an incomplete (20 %) sequence being the only representative from this phylum.<br /> - Annelida&nbsp;excludes Sipuncula sequences.<br /> - Cephalochordata: see Havird et al. (2008) for conservation of domains and residues in Cnidaria and other Chordata.</p> <p><strong>Related Reference:</strong>&nbsp;Havird, J.C., K. M. Kocot, P. M. Brannock, J. T. Cannon, D. S. Waits, D. A. Weese, S. R. Santos, K. M. Halanych. 2015. Reconstruction of cyclooxygenase evolution in animals suggests variable, lineage-specific prostaglandin synthesis pathways. Journal of Molecular Evolution. 80:193-208. DOI 10.1007/s00239-015-9670-3</p> <p><strong>Related Datasets:</strong><br /> <a href=\"https://www.bco-dmo.org/dataset/671730\">Havird_2015_T1: NCBI accessions: COX and PXDN</a><br /> <a href=\"https://www.bco-dmo.org/dataset/671750\">Havird_2015_T2: NCBI accessions: MPO and PXDN</a></p>