Isolation and characterization of microsatellite loci in the icefish Chionodraco rastrospinosus (Perciformes, Notothenioidea, Channichthyidae)

Abstract We characterized eight polymorphic microsatellites in the icefish Chionodraco rastrospinosus (Perciformes, Notothenioidea, Channichthyidae). Microsatellites were isolated from a partial genomic library enriched for an AC motif. Chionodraco rastrospinosus is an endemic species inhabiting sou...

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Published in:Molecular Ecology Notes
Main Authors: PAPETTI, CHIARA, ZANE, LORENZO, PATARNELLO, TOMASO
Format: Article in Journal/Newspaper
Language:English
Published: Wiley 2005
Subjects:
Online Access:http://dx.doi.org/10.1111/j.1471-8286.2005.01194.x
https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fj.1471-8286.2005.01194.x
https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1471-8286.2005.01194.x
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spelling crwiley:10.1111/j.1471-8286.2005.01194.x 2024-06-02T07:58:07+00:00 Isolation and characterization of microsatellite loci in the icefish Chionodraco rastrospinosus (Perciformes, Notothenioidea, Channichthyidae) PAPETTI, CHIARA ZANE, LORENZO PATARNELLO, TOMASO 2005 http://dx.doi.org/10.1111/j.1471-8286.2005.01194.x https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fj.1471-8286.2005.01194.x https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1471-8286.2005.01194.x en eng Wiley http://onlinelibrary.wiley.com/termsAndConditions#vor Molecular Ecology Notes volume 6, issue 1, page 207-209 ISSN 1471-8278 1471-8286 journal-article 2005 crwiley https://doi.org/10.1111/j.1471-8286.2005.01194.x 2024-05-03T11:03:12Z Abstract We characterized eight polymorphic microsatellites in the icefish Chionodraco rastrospinosus (Perciformes, Notothenioidea, Channichthyidae). Microsatellites were isolated from a partial genomic library enriched for an AC motif. Chionodraco rastrospinosus is an endemic species inhabiting southern ocean waters surrounding the Antarctic Peninsula, the South Shetland Islands, and the South Orkney Islands. An excess of homozygotes was observed in seven out of the eight investigated loci; however, presence of null alleles was detected only for three of them suggesting that other factors may act in reducing heterozygosity. These molecular markers will be useful to investigate icefish genetic structure, possibly providing insights on its effective population size and demographic history. Article in Journal/Newspaper Antarc* Antarctic Antarctic Peninsula Icefish South Orkney Islands South Shetland Islands Southern Ocean Wiley Online Library Antarctic Antarctic Peninsula South Orkney Islands ENVELOPE(-45.500,-45.500,-60.583,-60.583) South Shetland Islands Southern Ocean The Antarctic Molecular Ecology Notes 6 1 207 209
institution Open Polar
collection Wiley Online Library
op_collection_id crwiley
language English
description Abstract We characterized eight polymorphic microsatellites in the icefish Chionodraco rastrospinosus (Perciformes, Notothenioidea, Channichthyidae). Microsatellites were isolated from a partial genomic library enriched for an AC motif. Chionodraco rastrospinosus is an endemic species inhabiting southern ocean waters surrounding the Antarctic Peninsula, the South Shetland Islands, and the South Orkney Islands. An excess of homozygotes was observed in seven out of the eight investigated loci; however, presence of null alleles was detected only for three of them suggesting that other factors may act in reducing heterozygosity. These molecular markers will be useful to investigate icefish genetic structure, possibly providing insights on its effective population size and demographic history.
format Article in Journal/Newspaper
author PAPETTI, CHIARA
ZANE, LORENZO
PATARNELLO, TOMASO
spellingShingle PAPETTI, CHIARA
ZANE, LORENZO
PATARNELLO, TOMASO
Isolation and characterization of microsatellite loci in the icefish Chionodraco rastrospinosus (Perciformes, Notothenioidea, Channichthyidae)
author_facet PAPETTI, CHIARA
ZANE, LORENZO
PATARNELLO, TOMASO
author_sort PAPETTI, CHIARA
title Isolation and characterization of microsatellite loci in the icefish Chionodraco rastrospinosus (Perciformes, Notothenioidea, Channichthyidae)
title_short Isolation and characterization of microsatellite loci in the icefish Chionodraco rastrospinosus (Perciformes, Notothenioidea, Channichthyidae)
title_full Isolation and characterization of microsatellite loci in the icefish Chionodraco rastrospinosus (Perciformes, Notothenioidea, Channichthyidae)
title_fullStr Isolation and characterization of microsatellite loci in the icefish Chionodraco rastrospinosus (Perciformes, Notothenioidea, Channichthyidae)
title_full_unstemmed Isolation and characterization of microsatellite loci in the icefish Chionodraco rastrospinosus (Perciformes, Notothenioidea, Channichthyidae)
title_sort isolation and characterization of microsatellite loci in the icefish chionodraco rastrospinosus (perciformes, notothenioidea, channichthyidae)
publisher Wiley
publishDate 2005
url http://dx.doi.org/10.1111/j.1471-8286.2005.01194.x
https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fj.1471-8286.2005.01194.x
https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1471-8286.2005.01194.x
long_lat ENVELOPE(-45.500,-45.500,-60.583,-60.583)
geographic Antarctic
Antarctic Peninsula
South Orkney Islands
South Shetland Islands
Southern Ocean
The Antarctic
geographic_facet Antarctic
Antarctic Peninsula
South Orkney Islands
South Shetland Islands
Southern Ocean
The Antarctic
genre Antarc*
Antarctic
Antarctic Peninsula
Icefish
South Orkney Islands
South Shetland Islands
Southern Ocean
genre_facet Antarc*
Antarctic
Antarctic Peninsula
Icefish
South Orkney Islands
South Shetland Islands
Southern Ocean
op_source Molecular Ecology Notes
volume 6, issue 1, page 207-209
ISSN 1471-8278 1471-8286
op_rights http://onlinelibrary.wiley.com/termsAndConditions#vor
op_doi https://doi.org/10.1111/j.1471-8286.2005.01194.x
container_title Molecular Ecology Notes
container_volume 6
container_issue 1
container_start_page 207
op_container_end_page 209
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