Cobalamin producers and prokaryotic consumers in the Northwest Atlantic

• Published in: Environmental Microbiology
• Main Authors: Soto, Maria A., Desai, Dhwani, Bannon, Catherine, LaRoche, Julie, Bertrand, Erin M.
• Other Authors: Natural Sciences and Engineering Research Council of Canada, Ocean Frontier Institute, Simons Foundation
• Format: Article in Journal/Newspaper
• Language: English
• Published: Wiley 2023
• Subjects: Northwest Atlantic
• Online Access: http://dx.doi.org/10.1111/1462-2920.16363; https://onlinelibrary.wiley.com/doi/pdf/10.1111/1462-2920.16363; https://onlinelibrary.wiley.com/doi/full-xml/10.1111/1462-2920.16363

Abstract Cobalamin availability can influence primary productivity and ecological interactions in marine microbial communities. The characterization of cobalamin sources and sinks is a first step in investigating cobalamin dynamics and its impact on productivity. Here, we identify potential cobalamin sources and sinks on the Scotian Shelf and Slope in the Northwest Atlantic Ocean. Functional and taxonomic annotation of bulk metagenomic reads, combined with analysis of genome bins, were used to identify potential cobalamin sources and sinks. Cobalamin synthesis potential was mainly attributed to Rhodobacteraceae, Thaumarchaeota, and cyanobacteria ( Synechococcus and Prochlorococcus ). Cobalamin remodelling potential was mainly attributed to Alteromonadales, Pseudomonadales, Rhizobiales, Oceanospirilalles, Rhodobacteraceae, and Verrucomicrobia, while potential cobalamin consumers include Flavobacteriaceae, Actinobacteria, Porticoccaceae, Methylophiliaceae, and Thermoplasmatota. These complementary approaches identified taxa with the potential to be involved in cobalamin cycling on the Scotian Shelf and revealed genomic information required for further characterization. The Cob operon of Rhodobacterales bacterium HTCC2255, a strain with known importance in cobalamin cycling, was similar to a major cobalamin producer bin, suggesting that a related strain may represent a critical cobalamin source in this region. These results enable future inquiries that will enhance our understanding of how cobalamin shapes microbial interdependencies and productivity in this region.