Innovative microfossil (radiolarian) analysis using a system for automated image collection and AI-based classification of species

Abstract Microfossils are a powerful tool in earth sciences, and they have been widely used for the determination of geological age and in paleoenvironmental studies. However, the identification of fossil species requires considerable time and labor by experts with extensive knowledge and experience...

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Bibliographic Details
Published in:Scientific Reports
Main Authors: Itaki, Takuya, Taira, Yosuke, Kuwamori, Naoki, Saito, Hitoshi, Ikehara, Minoru, Hoshino, Tatsuhiko
Other Authors: JSPS KAKENHI
Format: Article in Journal/Newspaper
Language:English
Published: Springer Science and Business Media LLC 2020
Subjects:
Online Access:http://dx.doi.org/10.1038/s41598-020-77812-6
http://www.nature.com/articles/s41598-020-77812-6.pdf
http://www.nature.com/articles/s41598-020-77812-6
Description
Summary:Abstract Microfossils are a powerful tool in earth sciences, and they have been widely used for the determination of geological age and in paleoenvironmental studies. However, the identification of fossil species requires considerable time and labor by experts with extensive knowledge and experience. In this study, we successfully automated the acquisition of microfossil data using an artificial intelligence system that employs a computer-controlled microscope and deep learning methods. The system was used to calculate changes in the relative abundance (%) of Cycladophora davisiana , a siliceous microfossil species (Radiolaria) that is widely used as a stratigraphic tool in studies on Pleistocene sediments in the Southern Ocean. The estimates obtained using this system were consistent with the results obtained by a human expert (< ± 3.2%). In terms of efficiency, the developed system was capable of performing the classification tasks approximately three times faster than a human expert performing the same task.