Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient
In this report, we describe the complete genome assembly of a Pantoea agglomerans isolate, TH81, collected from a boreal forest soil associated with permafrost thaw. Using both Nanopore and Illumina sequences, we assembled four circular contigs totaling 4,983,504 bp ( N 50 , 4,127,869 bp), a complet...
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Online Access: | http://dx.doi.org/10.1128/mra.01486-18 https://journals.asm.org/doi/pdf/10.1128/MRA.01486-18 |
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crasmicro:10.1128/mra.01486-18 2023-05-15T17:56:16+02:00 Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient Humphrey, Jennie Seitz, Taylor Haan, Tracie Ducluzeau, Anne-Lise Drown, Devin M. Rasko, David HHS | NIH | National Institute of General Medical Sciences 2019 http://dx.doi.org/10.1128/mra.01486-18 https://journals.asm.org/doi/pdf/10.1128/MRA.01486-18 en eng American Society for Microbiology https://creativecommons.org/licenses/by/4.0/ https://journals.asm.org/non-commercial-tdm-license Microbiology Resource Announcements volume 8, issue 1 ISSN 2576-098X Genetics Immunology and Microbiology (miscellaneous) Molecular Biology journal-article 2019 crasmicro https://doi.org/10.1128/mra.01486-18 2023-04-12T13:53:42Z In this report, we describe the complete genome assembly of a Pantoea agglomerans isolate, TH81, collected from a boreal forest soil associated with permafrost thaw. Using both Nanopore and Illumina sequences, we assembled four circular contigs totaling 4,983,504 bp ( N 50 , 4,127,869 bp), a complete chromosome with three plasmids. Article in Journal/Newspaper permafrost ASM Journals (American Society for Microbiology - via Crossref) Microbiology Resource Announcements 8 1 |
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Open Polar |
collection |
ASM Journals (American Society for Microbiology - via Crossref) |
op_collection_id |
crasmicro |
language |
English |
topic |
Genetics Immunology and Microbiology (miscellaneous) Molecular Biology |
spellingShingle |
Genetics Immunology and Microbiology (miscellaneous) Molecular Biology Humphrey, Jennie Seitz, Taylor Haan, Tracie Ducluzeau, Anne-Lise Drown, Devin M. Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient |
topic_facet |
Genetics Immunology and Microbiology (miscellaneous) Molecular Biology |
description |
In this report, we describe the complete genome assembly of a Pantoea agglomerans isolate, TH81, collected from a boreal forest soil associated with permafrost thaw. Using both Nanopore and Illumina sequences, we assembled four circular contigs totaling 4,983,504 bp ( N 50 , 4,127,869 bp), a complete chromosome with three plasmids. |
author2 |
Rasko, David HHS | NIH | National Institute of General Medical Sciences |
format |
Article in Journal/Newspaper |
author |
Humphrey, Jennie Seitz, Taylor Haan, Tracie Ducluzeau, Anne-Lise Drown, Devin M. |
author_facet |
Humphrey, Jennie Seitz, Taylor Haan, Tracie Ducluzeau, Anne-Lise Drown, Devin M. |
author_sort |
Humphrey, Jennie |
title |
Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient |
title_short |
Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient |
title_full |
Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient |
title_fullStr |
Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient |
title_full_unstemmed |
Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient |
title_sort |
complete genome sequence of pantoea agglomerans th81, isolated from a permafrost thaw gradient |
publisher |
American Society for Microbiology |
publishDate |
2019 |
url |
http://dx.doi.org/10.1128/mra.01486-18 https://journals.asm.org/doi/pdf/10.1128/MRA.01486-18 |
genre |
permafrost |
genre_facet |
permafrost |
op_source |
Microbiology Resource Announcements volume 8, issue 1 ISSN 2576-098X |
op_rights |
https://creativecommons.org/licenses/by/4.0/ https://journals.asm.org/non-commercial-tdm-license |
op_doi |
https://doi.org/10.1128/mra.01486-18 |
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Microbiology Resource Announcements |
container_volume |
8 |
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1 |
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1766164394862968832 |