Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient

In this report, we describe the complete genome assembly of a Pantoea agglomerans isolate, TH81, collected from a boreal forest soil associated with permafrost thaw. Using both Nanopore and Illumina sequences, we assembled four circular contigs totaling 4,983,504 bp ( N 50 , 4,127,869 bp), a complet...

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Published in:Microbiology Resource Announcements
Main Authors: Humphrey, Jennie, Seitz, Taylor, Haan, Tracie, Ducluzeau, Anne-Lise, Drown, Devin M.
Other Authors: Rasko, David, HHS | NIH | National Institute of General Medical Sciences
Format: Article in Journal/Newspaper
Language:English
Published: American Society for Microbiology 2019
Subjects:
Genetics
Immunology and Microbiology (miscellaneous)
Molecular Biology
permafrost
Online Access:http://dx.doi.org/10.1128/mra.01486-18
https://journals.asm.org/doi/pdf/10.1128/MRA.01486-18
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spelling crasmicro:10.1128/mra.01486-18 2023-05-15T17:56:16+02:00 Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient Humphrey, Jennie Seitz, Taylor Haan, Tracie Ducluzeau, Anne-Lise Drown, Devin M. Rasko, David HHS | NIH | National Institute of General Medical Sciences 2019 http://dx.doi.org/10.1128/mra.01486-18 https://journals.asm.org/doi/pdf/10.1128/MRA.01486-18 en eng American Society for Microbiology https://creativecommons.org/licenses/by/4.0/ https://journals.asm.org/non-commercial-tdm-license Microbiology Resource Announcements volume 8, issue 1 ISSN 2576-098X Genetics Immunology and Microbiology (miscellaneous) Molecular Biology journal-article 2019 crasmicro https://doi.org/10.1128/mra.01486-18 2023-04-12T13:53:42Z In this report, we describe the complete genome assembly of a Pantoea agglomerans isolate, TH81, collected from a boreal forest soil associated with permafrost thaw. Using both Nanopore and Illumina sequences, we assembled four circular contigs totaling 4,983,504 bp ( N 50 , 4,127,869 bp), a complete chromosome with three plasmids. Article in Journal/Newspaper permafrost ASM Journals (American Society for Microbiology - via Crossref) Microbiology Resource Announcements 8 1
institution Open Polar
collection ASM Journals (American Society for Microbiology - via Crossref)
op_collection_id crasmicro
language English
topic Genetics
Immunology and Microbiology (miscellaneous)
Molecular Biology
spellingShingle Genetics
Immunology and Microbiology (miscellaneous)
Molecular Biology
Humphrey, Jennie
Seitz, Taylor
Haan, Tracie
Ducluzeau, Anne-Lise
Drown, Devin M.
Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient
topic_facet Genetics
Immunology and Microbiology (miscellaneous)
Molecular Biology
description In this report, we describe the complete genome assembly of a Pantoea agglomerans isolate, TH81, collected from a boreal forest soil associated with permafrost thaw. Using both Nanopore and Illumina sequences, we assembled four circular contigs totaling 4,983,504 bp ( N 50 , 4,127,869 bp), a complete chromosome with three plasmids.
author2 Rasko, David
HHS | NIH | National Institute of General Medical Sciences
format Article in Journal/Newspaper
author Humphrey, Jennie
Seitz, Taylor
Haan, Tracie
Ducluzeau, Anne-Lise
Drown, Devin M.
author_facet Humphrey, Jennie
Seitz, Taylor
Haan, Tracie
Ducluzeau, Anne-Lise
Drown, Devin M.
author_sort Humphrey, Jennie
title Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient
title_short Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient
title_full Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient
title_fullStr Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient
title_full_unstemmed Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient
title_sort complete genome sequence of pantoea agglomerans th81, isolated from a permafrost thaw gradient
publisher American Society for Microbiology
publishDate 2019
url http://dx.doi.org/10.1128/mra.01486-18
https://journals.asm.org/doi/pdf/10.1128/MRA.01486-18
genre permafrost
genre_facet permafrost
op_source Microbiology Resource Announcements
volume 8, issue 1
ISSN 2576-098X
op_rights https://creativecommons.org/licenses/by/4.0/
https://journals.asm.org/non-commercial-tdm-license
op_doi https://doi.org/10.1128/mra.01486-18
container_title Microbiology Resource Announcements
container_volume 8
container_issue 1
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