Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient

In this report, we describe the complete genome assembly of a Pantoea agglomerans isolate, TH81, collected from a boreal forest soil associated with permafrost thaw. Using both Nanopore and Illumina sequences, we assembled four circular contigs totaling 4,983,504 bp ( N 50 , 4,127,869 bp), a complet...

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Bibliographic Details
Published in:Microbiology Resource Announcements
Main Authors: Humphrey, Jennie, Seitz, Taylor, Haan, Tracie, Ducluzeau, Anne-Lise, Drown, Devin M.
Other Authors: Rasko, David, HHS | NIH | National Institute of General Medical Sciences
Format: Article in Journal/Newspaper
Language:English
Published: American Society for Microbiology 2019
Subjects:
Genetics
Immunology and Microbiology (miscellaneous)
Molecular Biology
permafrost
Online Access:http://dx.doi.org/10.1128/mra.01486-18
https://journals.asm.org/doi/pdf/10.1128/MRA.01486-18
Description
Summary:In this report, we describe the complete genome assembly of a Pantoea agglomerans isolate, TH81, collected from a boreal forest soil associated with permafrost thaw. Using both Nanopore and Illumina sequences, we assembled four circular contigs totaling 4,983,504 bp ( N 50 , 4,127,869 bp), a complete chromosome with three plasmids.

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