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1

Screening of Eurasian Tundra Reindeer for Viral Sequences by Next-Generation Sequencing

by Javier Sánchez Romano, Anna Omazic, Mikael Leijon, Åsa Hagström, Morten Tryland, Juha Kantanen, Tiina Reilas, Ulrika Rockström, Valery Fedorov, Ann Albihn
Published in International Journal of Environmental Research and Public Health (2021)
“... during 2016–2019. Next-generation sequencing analysis and BLAST-homology searches indicated the presence...”

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2

Screening of Eurasian Tundra Reindeer for Viral Sequences by Next-Generation Sequencing

by Javier Sánchez Romano, Anna Omazic, Mikael Leijon, Åsa Hagström, Morten Tryland, Juha Kantanen, Tiina Reilas, Ulrika Rockström, Valery Fedorov, Ann Albihn
Published in International Journal of Environmental Research and Public Health (2021)
“... during 2016–2019. Next-generation sequencing analysis and BLAST-homology searches indicated the presence...”

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Text
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3

Screening of Eurasian Tundra Reindeer for Viral Sequences by Next-Generation Sequencing

by Sánchez Romano, Javier, Omazic, Anna, Leijon, Mikael, Hagström, Åsa, Tryland, Morten, Kantanen, Juha, Reilas, Tiina, Rockström, Ulrika, Fedorov, Valery, Albihn, Ann
“... during 2016–2019. Next-generation sequencing analysis and BLAST-homology searches indicated the presence...”

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4

Exploring genetic diversity in natural and domestic populations through next generation sequencing

by Rafati, Nima
Published 2017
“... in evolutionary biology. The recent advent of next generation sequencing (NGS) technologies has dramatically...”

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Doctoral or Postdoctoral Thesis
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5

Evaluation of the effectiveness of next generation sequencing in the clinical practice of the medical genetic consultation in Khanty-Mansi region

by M. Yu. Donnikov, R. A. Illarionov, T. A. Izotova, L. N. Kolbasin, L. V. Kovalenko, М. Ю. Донников, Р. А. Илларионов, Т. А. Изотова, Л. Н. Колбасин, Л. В. Коваленко
Published in Nauchno-prakticheskii zhurnal «Medicinskaia genetika (2022)

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6

Molecular epidemiological study on Infectious Pancreatic Necrosis Virus isolates from aquafarms in Scotland over three decades

by Ulrich, Kristina
Published 2018
Subjects: “...Next Generation Sequencing...”

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Doctoral or Postdoctoral Thesis
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7

Data from: 16S rRNA amplicon sequencing for epidemiological surveys of bacteria in wildlife

by Galan, Maxime, Razzauti, Maria, Bard, Emilie, Bernard, Maria, Brouat, Carine, Charbonnel, Nathalie, Dehne-Garcia, Alexandre, Loiseau, Anne, Tatard, Caroline, Tamisier, Lucie, Vayssier-Taussat, Muriel, Vignes, Hélène, Cosson, Jean-François
Published 2016
Subjects: “...Next-generation sequencing...”

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8

MiSeq raw sequences (Run 1) of the V4 region 16S rRNA gene from the spleens of 355 murinae from Senegal and 21 positive and negative controls (part 1 to 4)

by Galan, Maxime, Razzauti, Maria, Bard, Emilie, Bernard, Maria, Brouat, Carine, Charbonnel, Nathalie, Dehne-Garcia, Alexandre, Loiseau, Anne, Tatard, Caroline, Tamisier, Lucie, Vayssier-Taussat, Muriel, Vignes, Hélène, Cosson, Jean-François
Published 2016
Subjects: “...Next-generation sequencing...”

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9

MiSeq raw sequences (Run 1) of the V4 region 16S rRNA gene from the spleens of 355 murinae from Senegal and 21 positive and negative controls (part 2 to 4)

by Galan, Maxime, Razzauti, Maria, Bard, Emilie, Bernard, Maria, Brouat, Carine, Charbonnel, Nathalie, Dehne-Garcia, Alexandre, Loiseau, Anne, Tatard, Caroline, Tamisier, Lucie, Vayssier-Taussat, Muriel, Vignes, Hélène, Cosson, Jean-François
Published 2016
Subjects: “...Next-generation sequencing...”

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Select result number 10
10

MiSeq raw sequences (Run 1) of the V4 region 16S rRNA gene from the spleens of 355 murinae from Senegal and 21 positive and negative controls (part 3 to 4)

by Galan, Maxime, Razzauti, Maria, Bard, Emilie, Bernard, Maria, Brouat, Carine, Charbonnel, Nathalie, Dehne-Garcia, Alexandre, Loiseau, Anne, Tatard, Caroline, Tamisier, Lucie, Vayssier-Taussat, Muriel, Vignes, Hélène, Cosson, Jean-François
Published 2016
Subjects: “...Next-generation sequencing...”

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Select result number 11
11

MiSeq raw sequences (Run 1) of the V4 region 16S rRNA gene from the spleens of 355 murinae from Senegal and 21 positive and negative controls (part 4 to 4)

by Galan, Maxime, Razzauti, Maria, Bard, Emilie, Bernard, Maria, Brouat, Carine, Charbonnel, Nathalie, Dehne-Garcia, Alexandre, Loiseau, Anne, Tatard, Caroline, Tamisier, Lucie, Vayssier-Taussat, Muriel, Vignes, Hélène, Cosson, Jean-François
Published 2016
Subjects: “...Next-generation sequencing...”

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12

MiSeq raw sequences (Run 2) of the V4 region 16S rRNA gene from the spleens of 348 murinae from Senegal and 26 positive and negative controls (part 1 to 3)

by Galan, Maxime, Razzauti, Maria, Bard, Emilie, Bernard, Maria, Brouat, Carine, Charbonnel, Nathalie, Dehne-Garcia, Alexandre, Loiseau, Anne, Tatard, Caroline, Tamisier, Lucie, Vayssier-Taussat, Muriel, Vignes, Hélène, Cosson, Jean-François
Published 2016
Subjects: “...Next-generation sequencing...”

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Select result number 13
13

MiSeq raw sequences (Run 2) of the V4 region 16S rRNA gene from the spleens of 348 murinae from Senegal and 26 positive and negative controls (part 2 to 3)

by Galan, Maxime, Razzauti, Maria, Bard, Emilie, Bernard, Maria, Brouat, Carine, Charbonnel, Nathalie, Dehne-Garcia, Alexandre, Loiseau, Anne, Tatard, Caroline, Tamisier, Lucie, Vayssier-Taussat, Muriel, Vignes, Hélène, Cosson, Jean-François
Published 2016
Subjects: “...Next-generation sequencing...”

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Select result number 14
14

MiSeq raw sequences (Run 2) of the V4 region 16S rRNA gene from the spleens of 348 murinae from Senegal and 26 positive and negative controls (part 3 to 3)

by Galan, Maxime, Razzauti, Maria, Bard, Emilie, Bernard, Maria, Brouat, Carine, Charbonnel, Nathalie, Dehne-Garcia, Alexandre, Loiseau, Anne, Tatard, Caroline, Tamisier, Lucie, Vayssier-Taussat, Muriel, Vignes, Hélène, Cosson, Jean-François
Published 2016
Subjects: “...Next-generation sequencing...”

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Select result number 15
15

Perl script for the extraction of the most abundant sequences for each OTU and each sample

by Galan, Maxime, Razzauti, Maria, Bard, Emilie, Bernard, Maria, Brouat, Carine, Charbonnel, Nathalie, Dehne-Garcia, Alexandre, Loiseau, Anne, Tatard, Caroline, Tamisier, Lucie, Vayssier-Taussat, Muriel, Vignes, Hélène, Cosson, Jean-François
Published 2016
Subjects: “...Next-generation sequencing...”

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Select result number 16
16

OTU table of raw abundance

by Galan, Maxime, Razzauti, Maria, Bard, Emilie, Bernard, Maria, Brouat, Carine, Charbonnel, Nathalie, Dehne-Garcia, Alexandre, Loiseau, Anne, Tatard, Caroline, Tamisier, Lucie, Vayssier-Taussat, Muriel, Vignes, Hélène, Cosson, Jean-François
Published 2016
Subjects: “...Next-generation sequencing...”

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Select result number 17
17

Table of presence and absence for the twelve pathogenic OTUs in the 704 analysed rodents

by Galan, Maxime, Razzauti, Maria, Bard, Emilie, Bernard, Maria, Brouat, Carine, Charbonnel, Nathalie, Dehne-Garcia, Alexandre, Loiseau, Anne, Tatard, Caroline, Tamisier, Lucie, Vayssier-Taussat, Muriel, Vignes, Hélène, Cosson, Jean-François
Published 2016
Subjects: “...Next-generation sequencing...”

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Select result number 18
18

Informations concerning the samples and positive and negative controls multiplexed in the two MiSeq runs

by Galan, Maxime, Razzauti, Maria, Bard, Emilie, Bernard, Maria, Brouat, Carine, Charbonnel, Nathalie, Dehne-Garcia, Alexandre, Loiseau, Anne, Tatard, Caroline, Tamisier, Lucie, Vayssier-Taussat, Muriel, Vignes, Hélène, Cosson, Jean-François
Published 2016
Subjects: “...Next-generation sequencing...”

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Select result number 19
19

Sequence alignment file of the 16S rRNA PCR primers and 41,113 sequences from 79 bacterial zoonotic genera

by Galan, Maxime, Razzauti, Maria, Bard, Emilie, Bernard, Maria, Brouat, Carine, Charbonnel, Nathalie, Dehne-Garcia, Alexandre, Loiseau, Anne, Tatard, Caroline, Tamisier, Lucie, Vayssier-Taussat, Muriel, Vignes, Hélène, Cosson, Jean-François
Published 2016
Subjects: “...Next-generation sequencing...”

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20

Sequence alignment files of the V4 hypervariable region of the 16S rRNA used for the phylogenetic analysis

by Galan, Maxime, Razzauti, Maria, Bard, Emilie, Bernard, Maria, Brouat, Carine, Charbonnel, Nathalie, Dehne-Garcia, Alexandre, Loiseau, Anne, Tatard, Caroline, Tamisier, Lucie, Vayssier-Taussat, Muriel, Vignes, Hélène, Cosson, Jean-François
Published 2016
Subjects: “...Next-generation sequencing...”

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Dataset