Data from: probing variation in reaction norms in wild populations: the importance of reliable environmental proxies

Many traits are phenotypically plastic, i.e., the same genotype expresses different phenotypes depending on the environment. Genotypes and individuals can vary in their response to the environment and this genetic (G×E) and individual (I×E) variation in reaction-norm slopes can have important ecolog...

Full description

Bibliographic Details
Main Authors: Ramakers, Jip J. C., Reed, Thomas E., Harris, Michael, Gienapp, Phillip
Format: Dataset
Language:unknown
Published: 2023
Subjects:
NAO
Online Access:https://zenodo.org/record/8360141
https://doi.org/10.5061/dryad.zcrjdfnjr
id ftzenodo:oai:zenodo.org:8360141
record_format openpolar
spelling ftzenodo:oai:zenodo.org:8360141 2023-10-09T21:50:47+02:00 Data from: probing variation in reaction norms in wild populations: the importance of reliable environmental proxies Ramakers, Jip J. C. Reed, Thomas E. Harris, Michael Gienapp, Phillip 2023-09-19 https://zenodo.org/record/8360141 https://doi.org/10.5061/dryad.zcrjdfnjr unknown https://zenodo.org/communities/dryad https://zenodo.org/record/8360141 https://doi.org/10.5061/dryad.zcrjdfnjr oai:zenodo.org:8360141 info:eu-repo/semantics/openAccess https://creativecommons.org/publicdomain/zero/1.0/legalcode Uria aalge laying date NAO info:eu-repo/semantics/other dataset 2023 ftzenodo https://doi.org/10.5061/dryad.zcrjdfnjr 2023-09-19T23:06:49Z Many traits are phenotypically plastic, i.e., the same genotype expresses different phenotypes depending on the environment. Genotypes and individuals can vary in their response to the environment and this genetic (G×E) and individual (I×E) variation in reaction-norm slopes can have important ecological or evolutionary consequences. Studies on I×E/G×E often fail to show slope variation, potentially due to the choice of the environmental covariate. Identifying the genuine environmental driver of phenotypic plasticity (the cue) is practically impossible and hence only proxies can be used. If the proxy is too weakly correlated with the cue, this may lead researchers to conclude there is little or no (variation in) plasticity, and hence lead to downwardly biased estimates of the potential for plastic responses (or evolutionary change in the slope) in response to environmental change. Alternatively, the Environment-Specific Mean phenotype (ESM) across individuals—which captures all environmental effects on the phenotype—as covariate should be less prone to such bias. We showed by simulation—after verifying the concept analytically—that using weakly correlated proxies indeed biased estimates of slope variation vis-à-vis the true cue downward but that ESM as a covariate held up well, even when multiple sources of I×E or an interaction between environments (I×E×E) existed in the data. Analysis of two real datasets revealed that estimated I×E and G×E, respectively, were more sizeable and precise when using ESM as opposed to reasonably informative environmental proxies. We argue that the ESM approach should be adopted by biologists as a yardstick in the study of (variation in) plasticity in the wild and that it may serve as a useful starting point for the search of better environmental proxies and unravelling complex I×E or G×E patterns. Data contain phenotypic breeding data and NAO data for the Common guillemot as described in Reed et al. (2006). These data were used as one of the two practical examples in the paper. ... Dataset common guillemot Uria aalge uria Zenodo
institution Open Polar
collection Zenodo
op_collection_id ftzenodo
language unknown
topic Uria aalge
laying date
NAO
spellingShingle Uria aalge
laying date
NAO
Ramakers, Jip J. C.
Reed, Thomas E.
Harris, Michael
Gienapp, Phillip
Data from: probing variation in reaction norms in wild populations: the importance of reliable environmental proxies
topic_facet Uria aalge
laying date
NAO
description Many traits are phenotypically plastic, i.e., the same genotype expresses different phenotypes depending on the environment. Genotypes and individuals can vary in their response to the environment and this genetic (G×E) and individual (I×E) variation in reaction-norm slopes can have important ecological or evolutionary consequences. Studies on I×E/G×E often fail to show slope variation, potentially due to the choice of the environmental covariate. Identifying the genuine environmental driver of phenotypic plasticity (the cue) is practically impossible and hence only proxies can be used. If the proxy is too weakly correlated with the cue, this may lead researchers to conclude there is little or no (variation in) plasticity, and hence lead to downwardly biased estimates of the potential for plastic responses (or evolutionary change in the slope) in response to environmental change. Alternatively, the Environment-Specific Mean phenotype (ESM) across individuals—which captures all environmental effects on the phenotype—as covariate should be less prone to such bias. We showed by simulation—after verifying the concept analytically—that using weakly correlated proxies indeed biased estimates of slope variation vis-à-vis the true cue downward but that ESM as a covariate held up well, even when multiple sources of I×E or an interaction between environments (I×E×E) existed in the data. Analysis of two real datasets revealed that estimated I×E and G×E, respectively, were more sizeable and precise when using ESM as opposed to reasonably informative environmental proxies. We argue that the ESM approach should be adopted by biologists as a yardstick in the study of (variation in) plasticity in the wild and that it may serve as a useful starting point for the search of better environmental proxies and unravelling complex I×E or G×E patterns. Data contain phenotypic breeding data and NAO data for the Common guillemot as described in Reed et al. (2006). These data were used as one of the two practical examples in the paper. ...
format Dataset
author Ramakers, Jip J. C.
Reed, Thomas E.
Harris, Michael
Gienapp, Phillip
author_facet Ramakers, Jip J. C.
Reed, Thomas E.
Harris, Michael
Gienapp, Phillip
author_sort Ramakers, Jip J. C.
title Data from: probing variation in reaction norms in wild populations: the importance of reliable environmental proxies
title_short Data from: probing variation in reaction norms in wild populations: the importance of reliable environmental proxies
title_full Data from: probing variation in reaction norms in wild populations: the importance of reliable environmental proxies
title_fullStr Data from: probing variation in reaction norms in wild populations: the importance of reliable environmental proxies
title_full_unstemmed Data from: probing variation in reaction norms in wild populations: the importance of reliable environmental proxies
title_sort data from: probing variation in reaction norms in wild populations: the importance of reliable environmental proxies
publishDate 2023
url https://zenodo.org/record/8360141
https://doi.org/10.5061/dryad.zcrjdfnjr
genre common guillemot
Uria aalge
uria
genre_facet common guillemot
Uria aalge
uria
op_relation https://zenodo.org/communities/dryad
https://zenodo.org/record/8360141
https://doi.org/10.5061/dryad.zcrjdfnjr
oai:zenodo.org:8360141
op_rights info:eu-repo/semantics/openAccess
https://creativecommons.org/publicdomain/zero/1.0/legalcode
op_doi https://doi.org/10.5061/dryad.zcrjdfnjr
_version_ 1779313848578211840