Data and scripts for "Experimental evidence on the influence of root-associated fungi on plant growth along altitude"
These files include the input data and scripts to reproduce the results from the article "Experimental evidence on the influence of root-associated fungi on plant growth along altitude". The fungal OTU and environmental data are stored in the "data_meta_otu.Rdata" file, and the s...
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Online Access: | https://zenodo.org/record/8321442 https://doi.org/10.5281/zenodo.8321442 |
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ftzenodo:oai:zenodo.org:8321442 2023-10-25T01:35:51+02:00 Data and scripts for "Experimental evidence on the influence of root-associated fungi on plant growth along altitude" Burg Skylar Ovaskainen Otso Furneaux Brendan Ivanova Natalia Abrahamyan Arusyak Niittynen Pekka Somervuo Panu Abrego Nerea 2023-09-06 https://zenodo.org/record/8321442 https://doi.org/10.5281/zenodo.8321442 unknown info:eu-repo/grantAgreement/AKA//346492/ info:eu-repo/grantAgreement/EC/H2020/856506/ info:eu-repo/grantAgreement/EC/HE/101057437/ info:eu-repo/grantAgreement/AKA//336212/ info:eu-repo/grantAgreement/AKA//342374/ info:eu-repo/grantAgreement/EC/HE/101059492/ info:eu-repo/grantAgreement/AKA//345110/ info:eu-repo/grantAgreement/AKA//308651/ doi:10.5281/zenodo.8321441 https://zenodo.org/record/8321442 https://doi.org/10.5281/zenodo.8321442 oai:zenodo.org:8321442 info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by/4.0/legalcode info:eu-repo/semantics/article publication-article 2023 ftzenodo https://doi.org/10.5281/zenodo.832144210.5281/zenodo.8321441 2023-09-26T22:58:49Z These files include the input data and scripts to reproduce the results from the article "Experimental evidence on the influence of root-associated fungi on plant growth along altitude". The fungal OTU and environmental data are stored in the "data_meta_otu.Rdata" file, and the scripts for performing the joint species distribution modelling described in the article are the files "S1-S5". The scripts should be run in the subsequent order from S1 to S5 in R software. As extensively explained in the main document, we investigated whether variations in root-associated fungal (RAF) community composition along altitudinal gradients influence plant growth at high altitudes, where both plants and fungi face harsher abiotic conditions. These data correspond to a translocation experiment between pairs of high and low altitude populations of Bistorta vivipara along three arctic altitudinal gradients in Kilpisjärvi. To separate the impact of shifting fungal communities from the overall influence of changing abiotic conditions, we used a root barrier to prevent new colonizations by RAF following translocation. To characterize the RAF communities, we applied DNA barcoding to the root samples using the ITS2 region. Through the utilization of joint species distribution modeling, we assessed the relationship between changes in plant functional traits resulting from experimental treatments and the corresponding changes in the RAF communities. Article in Journal/Newspaper Arctic Kilpisjärvi Zenodo Arctic Kilpisjärvi ENVELOPE(20.767,20.767,69.034,69.034) |
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Open Polar |
collection |
Zenodo |
op_collection_id |
ftzenodo |
language |
unknown |
description |
These files include the input data and scripts to reproduce the results from the article "Experimental evidence on the influence of root-associated fungi on plant growth along altitude". The fungal OTU and environmental data are stored in the "data_meta_otu.Rdata" file, and the scripts for performing the joint species distribution modelling described in the article are the files "S1-S5". The scripts should be run in the subsequent order from S1 to S5 in R software. As extensively explained in the main document, we investigated whether variations in root-associated fungal (RAF) community composition along altitudinal gradients influence plant growth at high altitudes, where both plants and fungi face harsher abiotic conditions. These data correspond to a translocation experiment between pairs of high and low altitude populations of Bistorta vivipara along three arctic altitudinal gradients in Kilpisjärvi. To separate the impact of shifting fungal communities from the overall influence of changing abiotic conditions, we used a root barrier to prevent new colonizations by RAF following translocation. To characterize the RAF communities, we applied DNA barcoding to the root samples using the ITS2 region. Through the utilization of joint species distribution modeling, we assessed the relationship between changes in plant functional traits resulting from experimental treatments and the corresponding changes in the RAF communities. |
format |
Article in Journal/Newspaper |
author |
Burg Skylar Ovaskainen Otso Furneaux Brendan Ivanova Natalia Abrahamyan Arusyak Niittynen Pekka Somervuo Panu Abrego Nerea |
spellingShingle |
Burg Skylar Ovaskainen Otso Furneaux Brendan Ivanova Natalia Abrahamyan Arusyak Niittynen Pekka Somervuo Panu Abrego Nerea Data and scripts for "Experimental evidence on the influence of root-associated fungi on plant growth along altitude" |
author_facet |
Burg Skylar Ovaskainen Otso Furneaux Brendan Ivanova Natalia Abrahamyan Arusyak Niittynen Pekka Somervuo Panu Abrego Nerea |
author_sort |
Burg Skylar |
title |
Data and scripts for "Experimental evidence on the influence of root-associated fungi on plant growth along altitude" |
title_short |
Data and scripts for "Experimental evidence on the influence of root-associated fungi on plant growth along altitude" |
title_full |
Data and scripts for "Experimental evidence on the influence of root-associated fungi on plant growth along altitude" |
title_fullStr |
Data and scripts for "Experimental evidence on the influence of root-associated fungi on plant growth along altitude" |
title_full_unstemmed |
Data and scripts for "Experimental evidence on the influence of root-associated fungi on plant growth along altitude" |
title_sort |
data and scripts for "experimental evidence on the influence of root-associated fungi on plant growth along altitude" |
publishDate |
2023 |
url |
https://zenodo.org/record/8321442 https://doi.org/10.5281/zenodo.8321442 |
long_lat |
ENVELOPE(20.767,20.767,69.034,69.034) |
geographic |
Arctic Kilpisjärvi |
geographic_facet |
Arctic Kilpisjärvi |
genre |
Arctic Kilpisjärvi |
genre_facet |
Arctic Kilpisjärvi |
op_relation |
info:eu-repo/grantAgreement/AKA//346492/ info:eu-repo/grantAgreement/EC/H2020/856506/ info:eu-repo/grantAgreement/EC/HE/101057437/ info:eu-repo/grantAgreement/AKA//336212/ info:eu-repo/grantAgreement/AKA//342374/ info:eu-repo/grantAgreement/EC/HE/101059492/ info:eu-repo/grantAgreement/AKA//345110/ info:eu-repo/grantAgreement/AKA//308651/ doi:10.5281/zenodo.8321441 https://zenodo.org/record/8321442 https://doi.org/10.5281/zenodo.8321442 oai:zenodo.org:8321442 |
op_rights |
info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by/4.0/legalcode |
op_doi |
https://doi.org/10.5281/zenodo.832144210.5281/zenodo.8321441 |
_version_ |
1780730876433268736 |