Chum salmon baseline for the Western Alaska Salmon Stock Identification Program
Uncertainty about the magnitude, frequency, location, and timing of the nonlocal harvest of sockeye and chum salmon was the impetus for the Western Alaska Salmon Stock Identification Program. The program was designed to use genetic data in mixed stock analysis to reduce this uncertainty. A baseline...
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ftzenodo:oai:zenodo.org:8185130 2024-09-15T18:16:54+00:00 Chum salmon baseline for the Western Alaska Salmon Stock Identification Program Dann, Tyler 2023-07-25 https://doi.org/10.5061/dryad.q2bvq83r1 unknown Zenodo http://www.adfg.alaska.gov/FedAidpdfs/SP12-26.pdf https://zenodo.org/communities/dryad https://doi.org/10.5061/dryad.q2bvq83r1 oai:zenodo.org:8185130 info:eu-repo/semantics/openAccess Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode chum salmon Oncorhynchus keta Population structure genetic baseline mixed stock analysis single nucleotide polymorphism SNP info:eu-repo/semantics/other 2023 ftzenodo https://doi.org/10.5061/dryad.q2bvq83r1 2024-07-25T23:46:00Z Uncertainty about the magnitude, frequency, location, and timing of the nonlocal harvest of sockeye and chum salmon was the impetus for the Western Alaska Salmon Stock Identification Program. The program was designed to use genetic data in mixed stock analysis to reduce this uncertainty. A baseline of allele frequencies in spawning populations is required for use in mixed-stock analysis to estimate the stock of origin of harvested fish. This report describes the methodology used to understand the population genetic structure among chum salmon populations and to build and test a baseline for use in mixed stock analysis of chum salmon. Of the 35,921 fish from 434 collections selected to be genotyped, the final baseline was composed of 32,817 fish from 402 collections representing 310 populations. Average population sample size was 106 fish. Reporting groups were determined through a combination of stakeholder needs and identifiability using genetic information, as measured using proof tests. The final reporting groups included Asia, Kotzebue Sound, Coastal Western Alaska, Upper Yukon River, Northern District (Alaska Peninsula), Northwest District (Alaska Peninsula), South Peninsula (Alaska Peninsula), Chignik/Kodiak, and East of Kodiak. Genepop and rubias . Funding provided by: Alaska Department of Fish and Game Crossref Funder Registry ID: http://dx.doi.org/10.13039/100008144 Award Number: Other/Unknown Material Kodiak Yukon river Alaska Yukon Zenodo |
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chum salmon Oncorhynchus keta Population structure genetic baseline mixed stock analysis single nucleotide polymorphism SNP |
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chum salmon Oncorhynchus keta Population structure genetic baseline mixed stock analysis single nucleotide polymorphism SNP Dann, Tyler Chum salmon baseline for the Western Alaska Salmon Stock Identification Program |
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chum salmon Oncorhynchus keta Population structure genetic baseline mixed stock analysis single nucleotide polymorphism SNP |
description |
Uncertainty about the magnitude, frequency, location, and timing of the nonlocal harvest of sockeye and chum salmon was the impetus for the Western Alaska Salmon Stock Identification Program. The program was designed to use genetic data in mixed stock analysis to reduce this uncertainty. A baseline of allele frequencies in spawning populations is required for use in mixed-stock analysis to estimate the stock of origin of harvested fish. This report describes the methodology used to understand the population genetic structure among chum salmon populations and to build and test a baseline for use in mixed stock analysis of chum salmon. Of the 35,921 fish from 434 collections selected to be genotyped, the final baseline was composed of 32,817 fish from 402 collections representing 310 populations. Average population sample size was 106 fish. Reporting groups were determined through a combination of stakeholder needs and identifiability using genetic information, as measured using proof tests. The final reporting groups included Asia, Kotzebue Sound, Coastal Western Alaska, Upper Yukon River, Northern District (Alaska Peninsula), Northwest District (Alaska Peninsula), South Peninsula (Alaska Peninsula), Chignik/Kodiak, and East of Kodiak. Genepop and rubias . Funding provided by: Alaska Department of Fish and Game Crossref Funder Registry ID: http://dx.doi.org/10.13039/100008144 Award Number: |
format |
Other/Unknown Material |
author |
Dann, Tyler |
author_facet |
Dann, Tyler |
author_sort |
Dann, Tyler |
title |
Chum salmon baseline for the Western Alaska Salmon Stock Identification Program |
title_short |
Chum salmon baseline for the Western Alaska Salmon Stock Identification Program |
title_full |
Chum salmon baseline for the Western Alaska Salmon Stock Identification Program |
title_fullStr |
Chum salmon baseline for the Western Alaska Salmon Stock Identification Program |
title_full_unstemmed |
Chum salmon baseline for the Western Alaska Salmon Stock Identification Program |
title_sort |
chum salmon baseline for the western alaska salmon stock identification program |
publisher |
Zenodo |
publishDate |
2023 |
url |
https://doi.org/10.5061/dryad.q2bvq83r1 |
genre |
Kodiak Yukon river Alaska Yukon |
genre_facet |
Kodiak Yukon river Alaska Yukon |
op_relation |
http://www.adfg.alaska.gov/FedAidpdfs/SP12-26.pdf https://zenodo.org/communities/dryad https://doi.org/10.5061/dryad.q2bvq83r1 oai:zenodo.org:8185130 |
op_rights |
info:eu-repo/semantics/openAccess Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode |
op_doi |
https://doi.org/10.5061/dryad.q2bvq83r1 |
_version_ |
1810454888755232768 |