Who knows Globorotalia mentum? – Making micropalaeontological data FAIR

Many micropalaeontological studies rely on merging data from different sources. Apart from accessibility issues and a myriad of different data formats, reusability is hindered because micropalaeontological data are semantically complex. This is because of the existence of different taxonomic schools...

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Main Authors: Jonkers, Lukas, Huber, Robert, Strack, Anne, Kucera, Michal
Format: Conference Object
Language:English
Published: 2023
Subjects:
Online Access:https://zenodo.org/record/8123935
https://doi.org/10.5281/zenodo.8123935
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spelling ftzenodo:oai:zenodo.org:8123935 2023-08-15T12:42:50+02:00 Who knows Globorotalia mentum? – Making micropalaeontological data FAIR Jonkers, Lukas Huber, Robert Strack, Anne Kucera, Michal 2023-07-07 https://zenodo.org/record/8123935 https://doi.org/10.5281/zenodo.8123935 eng eng doi:10.5281/zenodo.8123959 doi:10.5281/zenodo.8124211 doi:10.5281/zenodo.8124240 doi:10.5281/zenodo.8123934 https://zenodo.org/communities/nfdi4earth https://zenodo.org/record/8123935 https://doi.org/10.5281/zenodo.8123935 oai:zenodo.org:8123935 info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by/4.0/legalcode NFDI4Earth NFDI4Earth Pilot planktonic foraminifera taxonomy FAIR info:eu-repo/semantics/conferencePoster poster 2023 ftzenodo https://doi.org/10.5281/zenodo.812393510.5281/zenodo.812395910.5281/zenodo.812421110.5281/zenodo.812424010.5281/zenodo.8123934 2023-07-25T23:03:51Z Many micropalaeontological studies rely on merging data from different sources. Apart from accessibility issues and a myriad of different data formats, reusability is hindered because micropalaeontological data are semantically complex. This is because of the existence of different taxonomic schools and evolving taxonomic insights, which both render standardisation difficult. As a consequence reusing micropalaentological data is cumbersome, even when they are findable, accessible and interoperable. Moreover, semantic complexity leads to confusion and archiving errors, further complicating data reusability. Within the framework of the German National Research Data Infrastructure (NFDI) we aim to develop tools and processing pipelines to harmonise taxonomic data. Here we report on common problems associated with the standardisation of taxonomic data identified in a large number of micropalaeontological datasets publicly available at PANGAEA. We present possible solutions to increase the reusability of legacy data and propose guidelines for archiving of new datasets. This poster is intended as a starting point for discussion. Our assessment focussed on planktonic foraminifera because of the relatively simple taxonomy of this group. However, we explicitly invite feedback from all data generators and data users from the micropalaeontological community to discuss solutions that work for everyone and can be applied across different taxonomic groups and different research fields. This work has been funded by the German Research Foundation (NFDI4Earth Pilots 1st cohort, DFG project no. 460036893, https://www.nfdi4earth.de/) within the German National Research Data Infrastructure (NFDI, https://www.nfdi.de/). Conference Object Planktonic foraminifera Zenodo
institution Open Polar
collection Zenodo
op_collection_id ftzenodo
language English
topic NFDI4Earth
NFDI4Earth Pilot
planktonic foraminifera
taxonomy
FAIR
spellingShingle NFDI4Earth
NFDI4Earth Pilot
planktonic foraminifera
taxonomy
FAIR
Jonkers, Lukas
Huber, Robert
Strack, Anne
Kucera, Michal
Who knows Globorotalia mentum? – Making micropalaeontological data FAIR
topic_facet NFDI4Earth
NFDI4Earth Pilot
planktonic foraminifera
taxonomy
FAIR
description Many micropalaeontological studies rely on merging data from different sources. Apart from accessibility issues and a myriad of different data formats, reusability is hindered because micropalaeontological data are semantically complex. This is because of the existence of different taxonomic schools and evolving taxonomic insights, which both render standardisation difficult. As a consequence reusing micropalaentological data is cumbersome, even when they are findable, accessible and interoperable. Moreover, semantic complexity leads to confusion and archiving errors, further complicating data reusability. Within the framework of the German National Research Data Infrastructure (NFDI) we aim to develop tools and processing pipelines to harmonise taxonomic data. Here we report on common problems associated with the standardisation of taxonomic data identified in a large number of micropalaeontological datasets publicly available at PANGAEA. We present possible solutions to increase the reusability of legacy data and propose guidelines for archiving of new datasets. This poster is intended as a starting point for discussion. Our assessment focussed on planktonic foraminifera because of the relatively simple taxonomy of this group. However, we explicitly invite feedback from all data generators and data users from the micropalaeontological community to discuss solutions that work for everyone and can be applied across different taxonomic groups and different research fields. This work has been funded by the German Research Foundation (NFDI4Earth Pilots 1st cohort, DFG project no. 460036893, https://www.nfdi4earth.de/) within the German National Research Data Infrastructure (NFDI, https://www.nfdi.de/).
format Conference Object
author Jonkers, Lukas
Huber, Robert
Strack, Anne
Kucera, Michal
author_facet Jonkers, Lukas
Huber, Robert
Strack, Anne
Kucera, Michal
author_sort Jonkers, Lukas
title Who knows Globorotalia mentum? – Making micropalaeontological data FAIR
title_short Who knows Globorotalia mentum? – Making micropalaeontological data FAIR
title_full Who knows Globorotalia mentum? – Making micropalaeontological data FAIR
title_fullStr Who knows Globorotalia mentum? – Making micropalaeontological data FAIR
title_full_unstemmed Who knows Globorotalia mentum? – Making micropalaeontological data FAIR
title_sort who knows globorotalia mentum? – making micropalaeontological data fair
publishDate 2023
url https://zenodo.org/record/8123935
https://doi.org/10.5281/zenodo.8123935
genre Planktonic foraminifera
genre_facet Planktonic foraminifera
op_relation doi:10.5281/zenodo.8123959
doi:10.5281/zenodo.8124211
doi:10.5281/zenodo.8124240
doi:10.5281/zenodo.8123934
https://zenodo.org/communities/nfdi4earth
https://zenodo.org/record/8123935
https://doi.org/10.5281/zenodo.8123935
oai:zenodo.org:8123935
op_rights info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by/4.0/legalcode
op_doi https://doi.org/10.5281/zenodo.812393510.5281/zenodo.812395910.5281/zenodo.812421110.5281/zenodo.812424010.5281/zenodo.8123934
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