Galaxy and Scientific Communities: How to Incorporate New Ones, Uplift Engaged Ones and Maintain Mature Ones

The Galaxy platform has been designed as science domain-neutral and, recently, it has been expanding into new scientific communities. In this talk I will present examples from our work in the EuroScienceGateway project, which aims to leverage European computing infrastructures for data-intensive res...

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Main Authors: L. Liborio, P. Austin, A. Gonzalez-Beltran, E. Chadwick, V. Savchenko, A. Neronov, J. Iaquinta, A. Bretaudeau
Format: Conference Object
Language:English
Published: 2023
Subjects:
Online Access:https://zenodo.org/record/8114821
https://doi.org/10.5281/zenodo.8114821
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spelling ftzenodo:oai:zenodo.org:8114821 2023-07-30T04:01:52+02:00 Galaxy and Scientific Communities: How to Incorporate New Ones, Uplift Engaged Ones and Maintain Mature Ones L. Liborio P. Austin A. Gonzalez-Beltran E. Chadwick V. Savchenko A. Neronov J. Iaquinta A. Bretaudeau 2023-06-27 https://zenodo.org/record/8114821 https://doi.org/10.5281/zenodo.8114821 eng eng info:eu-repo/grantAgreement/EC/HE/101057388/ doi:10.5281/zenodo.8114820 https://zenodo.org/record/8114821 https://doi.org/10.5281/zenodo.8114821 oai:zenodo.org:8114821 info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by/4.0/legalcode Galaxy Platform Workflows Muons Climate Science Astrophysics Biodiversity info:eu-repo/semantics/lecture presentation 2023 ftzenodo https://doi.org/10.5281/zenodo.811482110.5281/zenodo.8114820 2023-07-11T23:03:07Z The Galaxy platform has been designed as science domain-neutral and, recently, it has been expanding into new scientific communities. In this talk I will present examples from our work in the EuroScienceGateway project, which aims to leverage European computing infrastructures for data-intensive research guided by FAIR principles. This work comprises the incorporation of the new communities of muon science, astrophysics, biodiversity and climate science into the Galaxy platform. As regards the muon community, I will introduce MuonGalaxy: a new Galaxy instance that allows members of the muon community to have better access to the software tools developed by the MSCP. Furthermore, I will also discuss how the biodiversity, climate science and astrophysics communities are integrating their state-of-the-art tools and workflows into Galaxy. The biodiversity community is using Galaxy to tackle the problem of annotating new genomes in the context of a tremendous increase of new genomic data. As regards the climate science community, it is using Galaxy to address computationally intensive use cases such as forecasting changes of vegetation and sea-ice in the Arctic. Finally, Astrophysics has a long tradition of FAIR data and workflow stewardship, and they are using Galaxy to harmonize these practices with those of other communities. Conference Object Arctic Sea ice Zenodo Arctic
institution Open Polar
collection Zenodo
op_collection_id ftzenodo
language English
topic Galaxy Platform
Workflows
Muons
Climate Science
Astrophysics
Biodiversity
spellingShingle Galaxy Platform
Workflows
Muons
Climate Science
Astrophysics
Biodiversity
L. Liborio
P. Austin
A. Gonzalez-Beltran
E. Chadwick
V. Savchenko
A. Neronov
J. Iaquinta
A. Bretaudeau
Galaxy and Scientific Communities: How to Incorporate New Ones, Uplift Engaged Ones and Maintain Mature Ones
topic_facet Galaxy Platform
Workflows
Muons
Climate Science
Astrophysics
Biodiversity
description The Galaxy platform has been designed as science domain-neutral and, recently, it has been expanding into new scientific communities. In this talk I will present examples from our work in the EuroScienceGateway project, which aims to leverage European computing infrastructures for data-intensive research guided by FAIR principles. This work comprises the incorporation of the new communities of muon science, astrophysics, biodiversity and climate science into the Galaxy platform. As regards the muon community, I will introduce MuonGalaxy: a new Galaxy instance that allows members of the muon community to have better access to the software tools developed by the MSCP. Furthermore, I will also discuss how the biodiversity, climate science and astrophysics communities are integrating their state-of-the-art tools and workflows into Galaxy. The biodiversity community is using Galaxy to tackle the problem of annotating new genomes in the context of a tremendous increase of new genomic data. As regards the climate science community, it is using Galaxy to address computationally intensive use cases such as forecasting changes of vegetation and sea-ice in the Arctic. Finally, Astrophysics has a long tradition of FAIR data and workflow stewardship, and they are using Galaxy to harmonize these practices with those of other communities.
format Conference Object
author L. Liborio
P. Austin
A. Gonzalez-Beltran
E. Chadwick
V. Savchenko
A. Neronov
J. Iaquinta
A. Bretaudeau
author_facet L. Liborio
P. Austin
A. Gonzalez-Beltran
E. Chadwick
V. Savchenko
A. Neronov
J. Iaquinta
A. Bretaudeau
author_sort L. Liborio
title Galaxy and Scientific Communities: How to Incorporate New Ones, Uplift Engaged Ones and Maintain Mature Ones
title_short Galaxy and Scientific Communities: How to Incorporate New Ones, Uplift Engaged Ones and Maintain Mature Ones
title_full Galaxy and Scientific Communities: How to Incorporate New Ones, Uplift Engaged Ones and Maintain Mature Ones
title_fullStr Galaxy and Scientific Communities: How to Incorporate New Ones, Uplift Engaged Ones and Maintain Mature Ones
title_full_unstemmed Galaxy and Scientific Communities: How to Incorporate New Ones, Uplift Engaged Ones and Maintain Mature Ones
title_sort galaxy and scientific communities: how to incorporate new ones, uplift engaged ones and maintain mature ones
publishDate 2023
url https://zenodo.org/record/8114821
https://doi.org/10.5281/zenodo.8114821
geographic Arctic
geographic_facet Arctic
genre Arctic
Sea ice
genre_facet Arctic
Sea ice
op_relation info:eu-repo/grantAgreement/EC/HE/101057388/
doi:10.5281/zenodo.8114820
https://zenodo.org/record/8114821
https://doi.org/10.5281/zenodo.8114821
oai:zenodo.org:8114821
op_rights info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by/4.0/legalcode
op_doi https://doi.org/10.5281/zenodo.811482110.5281/zenodo.8114820
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