hdr-bgnn/Morphology-analysis: Version 1.0.0

Release created to populate Zenodo. This code baseproduces a presence-absence table (default), create landmarks (optional), visualization oflandmarks (optional), and extracts measurements (optional) from a segmented fish image (see BGNN-trait-segmentation ). Secondarily, this repository provides a f...

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Main Authors: Thibault Tabarin, John Bradley, Meghan Balk, Hilmar Lapp
Format: Other/Unknown Material
Language:unknown
Published: Zenodo 2023
Subjects:
The Minnows
Online Access:https://doi.org/10.5281/zenodo.7987697
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spelling ftzenodo:oai:zenodo.org:7987697 2024-09-15T18:39:01+00:00 hdr-bgnn/Morphology-analysis: Version 1.0.0 Thibault Tabarin John Bradley Meghan Balk Hilmar Lapp 2023-05-30 https://doi.org/10.5281/zenodo.7987697 unknown Zenodo https://github.com/hdr-bgnn/Morphology-analysis/tree/v1.0.0 https://doi.org/10.5281/zenodo.7987696 https://doi.org/10.5281/zenodo.7987697 oai:zenodo.org:7987697 info:eu-repo/semantics/openAccess Other (Open) info:eu-repo/semantics/other 2023 ftzenodo https://doi.org/10.5281/zenodo.798769710.5281/zenodo.7987696 2024-07-27T01:31:42Z Release created to populate Zenodo. This code baseproduces a presence-absence table (default), create landmarks (optional), visualization oflandmarks (optional), and extracts measurements (optional) from a segmented fish image (see BGNN-trait-segmentation ). Secondarily, this repository provides a framework for creating modularized tools by using classes. A Docker container image of this codebase and its dependencies is automatically built and published each time a new release is published. The Docker container isolates dependencies and facilitates reproducible and version-tagged integration into Imageomics workflows (see for example the BGNN Core Workflow ). This tool was originally developed for the Minnows Project . Other/Unknown Material The Minnows Zenodo
institution Open Polar
collection Zenodo
op_collection_id ftzenodo
language unknown
description Release created to populate Zenodo. This code baseproduces a presence-absence table (default), create landmarks (optional), visualization oflandmarks (optional), and extracts measurements (optional) from a segmented fish image (see BGNN-trait-segmentation ). Secondarily, this repository provides a framework for creating modularized tools by using classes. A Docker container image of this codebase and its dependencies is automatically built and published each time a new release is published. The Docker container isolates dependencies and facilitates reproducible and version-tagged integration into Imageomics workflows (see for example the BGNN Core Workflow ). This tool was originally developed for the Minnows Project .
format Other/Unknown Material
author Thibault Tabarin
John Bradley
Meghan Balk
Hilmar Lapp
spellingShingle Thibault Tabarin
John Bradley
Meghan Balk
Hilmar Lapp
hdr-bgnn/Morphology-analysis: Version 1.0.0
author_facet Thibault Tabarin
John Bradley
Meghan Balk
Hilmar Lapp
author_sort Thibault Tabarin
title hdr-bgnn/Morphology-analysis: Version 1.0.0
title_short hdr-bgnn/Morphology-analysis: Version 1.0.0
title_full hdr-bgnn/Morphology-analysis: Version 1.0.0
title_fullStr hdr-bgnn/Morphology-analysis: Version 1.0.0
title_full_unstemmed hdr-bgnn/Morphology-analysis: Version 1.0.0
title_sort hdr-bgnn/morphology-analysis: version 1.0.0
publisher Zenodo
publishDate 2023
url https://doi.org/10.5281/zenodo.7987697
genre The Minnows
genre_facet The Minnows
op_relation https://github.com/hdr-bgnn/Morphology-analysis/tree/v1.0.0
https://doi.org/10.5281/zenodo.7987696
https://doi.org/10.5281/zenodo.7987697
oai:zenodo.org:7987697
op_rights info:eu-repo/semantics/openAccess
Other (Open)
op_doi https://doi.org/10.5281/zenodo.798769710.5281/zenodo.7987696
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