EMERGE Sample Metadata Sheet for Samples with Microbiomes

• Main Authors: Hodgkins, Suzanne, Wilson, Rachel, Chanton, Jeffrey, Rich, Virginia
• Format: Other/Unknown Material
• Language: English
• Published: Zenodo 2022
• Subjects: EMERGE Biology Integration Institute; Stordalen Mire; Abisko; Swedish Polar Research Secretariat
• Online Access: https://doi.org/10.5281/zenodo.7720573

The EMERGE Sample Metadata Sheet is a data compilation published by the EMERGE Biology Integration Institute , providing basic (meta)data (including field sample info and biogeochemistry data) for samples with linked metagenomes (metaGs). It was generated by parsing and cleaning up the "Depth-Info" and "Biogeochemistry" query output from the EMERGE Database (EMERGE-DB; https://emerge-db.asc.ohio-state.edu/ ). Additional information, including column descriptions, is provided in the accompanying PDF (see list of included files below). FILES: coring_geochem_sequenced_samples_1.1.0.csv - The Sample Metadata Sheet. variable_defs_availability_sequenced_samples_public_1.1.0.pdf - A README / FAQ file with additional information and variable descriptions for the Sample Metadata Sheet. variables_coring_geochem_sequenced_samples_public_1.1.0.csv - CSV version of the variable descriptions table from the README / FAQ. FUNDING: This research is a contribution of the EMERGE Biology Integration Institute, funded by the National Science Foundation, Biology Integration Institutes Program, Award # 2022070. We thank the Swedish Polar Research Secretariat and SITES for the support of the work done at the Abisko Scientific Research Station. SITES is supported by the Swedish Research Council's grant 4.3-2021-00164. This study was also funded by the Genomic Science Program of the United States Department of Energy Office of Biological and Environmental Research, grant #s DE-SC0004632, DE-SC0010580, and DE-SC0016440. Note: A previous version of the variable definitions CSV file (variables_coring_geochem_sequenced_samples_public_1.0.1.csv) was erroneously left in and can no longer be removed from this version; please disregard that file.