DATA FOR NON-INVASIVE (PHOTO) INDIVIDUAL FISH IDENTIFICATION OF MULTIPLE SPECIES
This paper describes data from five studies focused on the individual fish identification of the same species. The lateral images of five fish species are present in the dataset. The dataset's primary purpose is to provide a data to develop a non-invasive and remote method of individual fish id...
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ftzenodo:oai:zenodo.org:7214419 2023-06-06T11:51:58+02:00 DATA FOR NON-INVASIVE (PHOTO) INDIVIDUAL FISH IDENTIFICATION OF MULTIPLE SPECIES Dinara Bartunek Petr Cisar 2022-11-07 https://zenodo.org/record/7214419 https://doi.org/10.5281/zenodo.7214419 ang ang doi:10.5281/zenodo.7214418 https://zenodo.org/record/7214419 https://doi.org/10.5281/zenodo.7214419 oai:zenodo.org:7214419 info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by/4.0/legalcode fish lateral image automation machine learning computer vision fish individual identification non-invasive identification tagging info:eu-repo/semantics/other dataset 2022 ftzenodo https://doi.org/10.5281/zenodo.721441910.5281/zenodo.7214418 2023-04-13T21:41:33Z This paper describes data from five studies focused on the individual fish identification of the same species. The lateral images of five fish species are present in the dataset. The dataset's primary purpose is to provide a data to develop a non-invasive and remote method of individual fish identification using fish skin patterns, which can serve as a substitute for the common invasive fish tagging. The lateral images of the whole fish body on the homogenous background for Sumatra barb, Atlantic salmon, Sea bass, Common carp and Rainbow trout are available with automatically extracted parts of the fish with skin patterns. A different number of individuals (Sumatra barb – 43, Atlantic salmon – 330, Sea bass – 300, Common carp – 32, Rainbow trout - 1849) were photographed by the digital camera Nikon D60 under controlled conditions. The photographs of only one side of the fish with several (from 3 to 20) repetitions were taken. Common carp, Rainbow trout and Sea bass were photographed out of the water. Atlantic salmon was photographed underwater, out of the water, and the eye of the fish was photographed by the microscope camera. Sumatra barb was photographed under the water only. For all species, except Rainbow trout, the data collection was repeated after a different period (Sumatra barb – four months, Atlantic salmon – six months, Sea bass – one month, Common carp – four months) to collect the data for a study of skin patter changes (aging). The development of the method for photo-based individual fish identification was performed on all datasets. The identification accuracy for all species for all periods was 100% using the nearest neighbour classification. Different methods for skin pattern parametrization were used. The dataset can be used to develop remote and non-invasive individual fish identification methods. The studies focused on the discrimination power of the skin pattern can benefit from it. The changes of skin patterns due to fish aging can be explored from the dataset. Dataset Atlantic salmon Zenodo |
institution |
Open Polar |
collection |
Zenodo |
op_collection_id |
ftzenodo |
language |
Old English |
topic |
fish lateral image automation machine learning computer vision fish individual identification non-invasive identification tagging |
spellingShingle |
fish lateral image automation machine learning computer vision fish individual identification non-invasive identification tagging Dinara Bartunek Petr Cisar DATA FOR NON-INVASIVE (PHOTO) INDIVIDUAL FISH IDENTIFICATION OF MULTIPLE SPECIES |
topic_facet |
fish lateral image automation machine learning computer vision fish individual identification non-invasive identification tagging |
description |
This paper describes data from five studies focused on the individual fish identification of the same species. The lateral images of five fish species are present in the dataset. The dataset's primary purpose is to provide a data to develop a non-invasive and remote method of individual fish identification using fish skin patterns, which can serve as a substitute for the common invasive fish tagging. The lateral images of the whole fish body on the homogenous background for Sumatra barb, Atlantic salmon, Sea bass, Common carp and Rainbow trout are available with automatically extracted parts of the fish with skin patterns. A different number of individuals (Sumatra barb – 43, Atlantic salmon – 330, Sea bass – 300, Common carp – 32, Rainbow trout - 1849) were photographed by the digital camera Nikon D60 under controlled conditions. The photographs of only one side of the fish with several (from 3 to 20) repetitions were taken. Common carp, Rainbow trout and Sea bass were photographed out of the water. Atlantic salmon was photographed underwater, out of the water, and the eye of the fish was photographed by the microscope camera. Sumatra barb was photographed under the water only. For all species, except Rainbow trout, the data collection was repeated after a different period (Sumatra barb – four months, Atlantic salmon – six months, Sea bass – one month, Common carp – four months) to collect the data for a study of skin patter changes (aging). The development of the method for photo-based individual fish identification was performed on all datasets. The identification accuracy for all species for all periods was 100% using the nearest neighbour classification. Different methods for skin pattern parametrization were used. The dataset can be used to develop remote and non-invasive individual fish identification methods. The studies focused on the discrimination power of the skin pattern can benefit from it. The changes of skin patterns due to fish aging can be explored from the dataset. |
format |
Dataset |
author |
Dinara Bartunek Petr Cisar |
author_facet |
Dinara Bartunek Petr Cisar |
author_sort |
Dinara Bartunek |
title |
DATA FOR NON-INVASIVE (PHOTO) INDIVIDUAL FISH IDENTIFICATION OF MULTIPLE SPECIES |
title_short |
DATA FOR NON-INVASIVE (PHOTO) INDIVIDUAL FISH IDENTIFICATION OF MULTIPLE SPECIES |
title_full |
DATA FOR NON-INVASIVE (PHOTO) INDIVIDUAL FISH IDENTIFICATION OF MULTIPLE SPECIES |
title_fullStr |
DATA FOR NON-INVASIVE (PHOTO) INDIVIDUAL FISH IDENTIFICATION OF MULTIPLE SPECIES |
title_full_unstemmed |
DATA FOR NON-INVASIVE (PHOTO) INDIVIDUAL FISH IDENTIFICATION OF MULTIPLE SPECIES |
title_sort |
data for non-invasive (photo) individual fish identification of multiple species |
publishDate |
2022 |
url |
https://zenodo.org/record/7214419 https://doi.org/10.5281/zenodo.7214419 |
genre |
Atlantic salmon |
genre_facet |
Atlantic salmon |
op_relation |
doi:10.5281/zenodo.7214418 https://zenodo.org/record/7214419 https://doi.org/10.5281/zenodo.7214419 oai:zenodo.org:7214419 |
op_rights |
info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by/4.0/legalcode |
op_doi |
https://doi.org/10.5281/zenodo.721441910.5281/zenodo.7214418 |
_version_ |
1767957778904645632 |