Data from: Spatial familial networks to infer demographic structure of wild populations

In social species, reproductive success and rates of dispersal vary among individuals resulting in spatially structured populations. Network analyses of familial relationships may provide insights on how these parameters influence population-level demographic patterns. These methods have however rar...

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Main Authors: McFarlane, Samantha, Manseau, Micheline, Wilson, Paul J.
Format: Other/Unknown Material
Language:unknown
Published: Zenodo 2022
Subjects:
Online Access:https://doi.org/10.5061/dryad.zkh189385
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spelling ftzenodo:oai:zenodo.org:5920828 2024-09-15T18:31:48+00:00 Data from: Spatial familial networks to infer demographic structure of wild populations McFarlane, Samantha Manseau, Micheline Wilson, Paul J. 2022-01-30 https://doi.org/10.5061/dryad.zkh189385 unknown Zenodo https://doi.org/10.22541/au.159908956.65473121 https://zenodo.org/communities/dryad https://doi.org/10.5061/dryad.zkh189385 oai:zenodo.org:5920828 info:eu-repo/semantics/openAccess Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode info:eu-repo/semantics/other 2022 ftzenodo https://doi.org/10.5061/dryad.zkh18938510.22541/au.159908956.65473121 2024-07-25T10:35:12Z In social species, reproductive success and rates of dispersal vary among individuals resulting in spatially structured populations. Network analyses of familial relationships may provide insights on how these parameters influence population-level demographic patterns. These methods have however rarely been applied to genetically-derived pedigree data from wild populations. Here we use parent-offspring relationships to construct familial networks from polygamous boreal woodland caribou ( Rangifer tarandus caribou ) in Saskatchewan, Canada, to inform recovery efforts. We collected samples from 933 individuals at 15 variable microsatellite loci along with caribou-specific primers for sex identification. Using network measures, we assess the contribution of individual caribou to the population with several centrality measures and then determine which measures are best suited to inform on the population demographic structure. We investigate the centrality of individuals from eighteen different local areas, along with the entire population. We found substantial differences in centrality of individuals in different local areas, that in turn contributed differently to the full network, highlighting the importance of analyzing networks at different scales. The full network revealed that boreal caribou in Saskatchewan form a complex, interconnected familial network, as the removal of edges with high betweenness did not result in distinct subgroups. Alpha, betweenness, and eccentricity centrality were the most informative measures to characterize the population demographic structure and for spatially identifying areas of highest fitness levels and family cohesion across the range. We found varied levels of dispersal, fitness and cohesion in family groups. Synthesis and applications : Our results demonstrate the value of different network measures in assessing genetically-derived familial networks. The spatial application of the familial networks identified individuals presenting different fitness levels, short and ... Other/Unknown Material Rangifer tarandus Zenodo
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collection Zenodo
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description In social species, reproductive success and rates of dispersal vary among individuals resulting in spatially structured populations. Network analyses of familial relationships may provide insights on how these parameters influence population-level demographic patterns. These methods have however rarely been applied to genetically-derived pedigree data from wild populations. Here we use parent-offspring relationships to construct familial networks from polygamous boreal woodland caribou ( Rangifer tarandus caribou ) in Saskatchewan, Canada, to inform recovery efforts. We collected samples from 933 individuals at 15 variable microsatellite loci along with caribou-specific primers for sex identification. Using network measures, we assess the contribution of individual caribou to the population with several centrality measures and then determine which measures are best suited to inform on the population demographic structure. We investigate the centrality of individuals from eighteen different local areas, along with the entire population. We found substantial differences in centrality of individuals in different local areas, that in turn contributed differently to the full network, highlighting the importance of analyzing networks at different scales. The full network revealed that boreal caribou in Saskatchewan form a complex, interconnected familial network, as the removal of edges with high betweenness did not result in distinct subgroups. Alpha, betweenness, and eccentricity centrality were the most informative measures to characterize the population demographic structure and for spatially identifying areas of highest fitness levels and family cohesion across the range. We found varied levels of dispersal, fitness and cohesion in family groups. Synthesis and applications : Our results demonstrate the value of different network measures in assessing genetically-derived familial networks. The spatial application of the familial networks identified individuals presenting different fitness levels, short and ...
format Other/Unknown Material
author McFarlane, Samantha
Manseau, Micheline
Wilson, Paul J.
spellingShingle McFarlane, Samantha
Manseau, Micheline
Wilson, Paul J.
Data from: Spatial familial networks to infer demographic structure of wild populations
author_facet McFarlane, Samantha
Manseau, Micheline
Wilson, Paul J.
author_sort McFarlane, Samantha
title Data from: Spatial familial networks to infer demographic structure of wild populations
title_short Data from: Spatial familial networks to infer demographic structure of wild populations
title_full Data from: Spatial familial networks to infer demographic structure of wild populations
title_fullStr Data from: Spatial familial networks to infer demographic structure of wild populations
title_full_unstemmed Data from: Spatial familial networks to infer demographic structure of wild populations
title_sort data from: spatial familial networks to infer demographic structure of wild populations
publisher Zenodo
publishDate 2022
url https://doi.org/10.5061/dryad.zkh189385
genre Rangifer tarandus
genre_facet Rangifer tarandus
op_relation https://doi.org/10.22541/au.159908956.65473121
https://zenodo.org/communities/dryad
https://doi.org/10.5061/dryad.zkh189385
oai:zenodo.org:5920828
op_rights info:eu-repo/semantics/openAccess
Creative Commons Zero v1.0 Universal
https://creativecommons.org/publicdomain/zero/1.0/legalcode
op_doi https://doi.org/10.5061/dryad.zkh18938510.22541/au.159908956.65473121
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