DNA-metabarcoding reveals the importance of gelatinous zooplankton in the diet of Pandalus borealis, a keystone species in the Arctic

Information about the dietary composition of species is crucial to understand their position and role in the food web. Stomach content analysis (SCA) and stable isotope analysis (SIA) are commonly used to study marine trophic relationships. SCA can provide high taxonomic resolution but requires taxo...

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Main Authors: Urban, Paulina, Præbel, Kim, Bhat, Shripathi, Dierking, Jan, Wangensteen, Owen S.
Format: Other/Unknown Material
Language:unknown
Published: Zenodo 2022
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Online Access:https://doi.org/10.5061/dryad.xwdbrv1b6
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spelling ftzenodo:oai:zenodo.org:5836076 2024-09-15T17:58:01+00:00 DNA-metabarcoding reveals the importance of gelatinous zooplankton in the diet of Pandalus borealis, a keystone species in the Arctic Urban, Paulina Præbel, Kim Bhat, Shripathi Dierking, Jan Wangensteen, Owen S. 2022-01-11 https://doi.org/10.5061/dryad.xwdbrv1b6 unknown Zenodo https://zenodo.org/communities/dryad https://doi.org/10.5061/dryad.xwdbrv1b6 oai:zenodo.org:5836076 info:eu-repo/semantics/openAccess Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode info:eu-repo/semantics/other 2022 ftzenodo https://doi.org/10.5061/dryad.xwdbrv1b6 2024-07-26T19:46:01Z Information about the dietary composition of species is crucial to understand their position and role in the food web. Stomach content analysis (SCA) and stable isotope analysis (SIA) are commonly used to study marine trophic relationships. SCA can provide high taxonomic resolution but requires taxonomic expertise and frequently underestimates digestible taxa. SIA provides a time-integrated view of the dietary sources but often lacks in taxonomic resolution. The use of molecular approaches such as DNA-metabarcoding may alleviate these problems. Here, we used DNA-metabarcoding with universal primers for cytochrome c oxidase I (COI), to study the diet composition of the Northern shrimp ( Pandalus borealis ) from the Barents Sea, a keystone species in the Arctic region with large socio-economic importance. Across locations, jellyfish and chaetognaths were the most important components in the diet of P. borealis , jointly accounting for 40-60% of the total read abundance. This dietary importance of gelatinous zooplankton contrasts sharply with published results based on SCA. At the same time, diet composition differed between fjord and shelf locations, pointing to different food webs supporting P. borealis in these two systems. Our study underscores the potential of molecular approaches to provide important new insights into the diet of marine invertebrates that are difficult or impossible to obtain with traditional methods, and calls for a revision of the role of gelatinous zooplankton in the diet of the key Arctic species P. borealis , and in extension, Arctic food webs. Cruise Location Abbr. Latitude Longitude October 2018 Kvænangenfjord Kv 7004.773 2123.388 January 2019 Inner Isfjorden II 7819.260 1516.465 January 2019 Rekesøyla Re 7818.269 1228.712 January 2019 Kongsfjordrenna Kf 7859.138 0926.922 January 2019 Kongsgrunnen Kg 7934.169 0901.532 January 2019 Minkebanken Mb 7809.982 0956.255 January 2019 North No 7957.086 0902.478 The file "Pandalus_borealis_prey_metabarcoding_finaldataset.csv contain" contains ... Other/Unknown Material Barents Sea Kongsfjord* northern shrimp Pandalus borealis Zooplankton Zenodo
institution Open Polar
collection Zenodo
op_collection_id ftzenodo
language unknown
description Information about the dietary composition of species is crucial to understand their position and role in the food web. Stomach content analysis (SCA) and stable isotope analysis (SIA) are commonly used to study marine trophic relationships. SCA can provide high taxonomic resolution but requires taxonomic expertise and frequently underestimates digestible taxa. SIA provides a time-integrated view of the dietary sources but often lacks in taxonomic resolution. The use of molecular approaches such as DNA-metabarcoding may alleviate these problems. Here, we used DNA-metabarcoding with universal primers for cytochrome c oxidase I (COI), to study the diet composition of the Northern shrimp ( Pandalus borealis ) from the Barents Sea, a keystone species in the Arctic region with large socio-economic importance. Across locations, jellyfish and chaetognaths were the most important components in the diet of P. borealis , jointly accounting for 40-60% of the total read abundance. This dietary importance of gelatinous zooplankton contrasts sharply with published results based on SCA. At the same time, diet composition differed between fjord and shelf locations, pointing to different food webs supporting P. borealis in these two systems. Our study underscores the potential of molecular approaches to provide important new insights into the diet of marine invertebrates that are difficult or impossible to obtain with traditional methods, and calls for a revision of the role of gelatinous zooplankton in the diet of the key Arctic species P. borealis , and in extension, Arctic food webs. Cruise Location Abbr. Latitude Longitude October 2018 Kvænangenfjord Kv 7004.773 2123.388 January 2019 Inner Isfjorden II 7819.260 1516.465 January 2019 Rekesøyla Re 7818.269 1228.712 January 2019 Kongsfjordrenna Kf 7859.138 0926.922 January 2019 Kongsgrunnen Kg 7934.169 0901.532 January 2019 Minkebanken Mb 7809.982 0956.255 January 2019 North No 7957.086 0902.478 The file "Pandalus_borealis_prey_metabarcoding_finaldataset.csv contain" contains ...
format Other/Unknown Material
author Urban, Paulina
Præbel, Kim
Bhat, Shripathi
Dierking, Jan
Wangensteen, Owen S.
spellingShingle Urban, Paulina
Præbel, Kim
Bhat, Shripathi
Dierking, Jan
Wangensteen, Owen S.
DNA-metabarcoding reveals the importance of gelatinous zooplankton in the diet of Pandalus borealis, a keystone species in the Arctic
author_facet Urban, Paulina
Præbel, Kim
Bhat, Shripathi
Dierking, Jan
Wangensteen, Owen S.
author_sort Urban, Paulina
title DNA-metabarcoding reveals the importance of gelatinous zooplankton in the diet of Pandalus borealis, a keystone species in the Arctic
title_short DNA-metabarcoding reveals the importance of gelatinous zooplankton in the diet of Pandalus borealis, a keystone species in the Arctic
title_full DNA-metabarcoding reveals the importance of gelatinous zooplankton in the diet of Pandalus borealis, a keystone species in the Arctic
title_fullStr DNA-metabarcoding reveals the importance of gelatinous zooplankton in the diet of Pandalus borealis, a keystone species in the Arctic
title_full_unstemmed DNA-metabarcoding reveals the importance of gelatinous zooplankton in the diet of Pandalus borealis, a keystone species in the Arctic
title_sort dna-metabarcoding reveals the importance of gelatinous zooplankton in the diet of pandalus borealis, a keystone species in the arctic
publisher Zenodo
publishDate 2022
url https://doi.org/10.5061/dryad.xwdbrv1b6
genre Barents Sea
Kongsfjord*
northern shrimp
Pandalus borealis
Zooplankton
genre_facet Barents Sea
Kongsfjord*
northern shrimp
Pandalus borealis
Zooplankton
op_relation https://zenodo.org/communities/dryad
https://doi.org/10.5061/dryad.xwdbrv1b6
oai:zenodo.org:5836076
op_rights info:eu-repo/semantics/openAccess
Creative Commons Zero v1.0 Universal
https://creativecommons.org/publicdomain/zero/1.0/legalcode
op_doi https://doi.org/10.5061/dryad.xwdbrv1b6
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