The fungal literature-based occurrence database for southern West Siberia (Russia)

The paper presents the initiative on literature-based occurrence data mobilisation of fungi and fungi-related organisms (literature-based occurrences, Darwin Core MaterialCitation) to develop the Fungal literature-based occurrence database for the southern West Siberia (FuSWS). The initiative on mob...

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Published in:Biodiversity Data Journal
Main Authors: Filippova, Nina, Ageev, Dmitry, Bolshakov, Sergey, Davydov, Evgeny, Filippova, Aleksandra, Filippov, Ilya, Gashkov, Sergei, Gorbunova, Irina, Kalinina, Ludmila, Kudashova, Nadezhda, Palomozhnykh, Ekaterina, Shabanova, Natalia, Tomoshevich, Maria, Vayshlya, Olga, Vlasenko, Anastasia, Vlasenko, Vyacheslav, Vorob'eva, Irina, Yakovchenko, Lidia, Zvyagina, Elena
Format: Article in Journal/Newspaper
Language:unknown
Published: Pensoft Publishers 2021
Subjects:
Online Access:https://doi.org/10.3897/BDJ.9.e76789
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spelling ftzenodo:oai:zenodo.org:5794779 2024-09-15T18:40:03+00:00 The fungal literature-based occurrence database for southern West Siberia (Russia) Filippova, Nina Ageev, Dmitry Bolshakov, Sergey Davydov, Evgeny Filippova, Aleksandra Filippov, Ilya Gashkov, Sergei Gorbunova, Irina Kalinina, Ludmila Kudashova, Nadezhda Palomozhnykh, Ekaterina Shabanova, Natalia Tomoshevich, Maria Vayshlya, Olga Vlasenko, Anastasia Vlasenko, Vyacheslav Vorob'eva, Irina Yakovchenko, Lidia Zvyagina, Elena 2021-12-13 https://doi.org/10.3897/BDJ.9.e76789 unknown Pensoft Publishers https://doi.org/10.3897/BDJ.9.e76789.figure1 https://doi.org/10.3897/BDJ.9.e76789.figure2 https://doi.org/10.3897/BDJ.9.e76789.suppl1 https://zenodo.org/communities/biosyslit https://doi.org/10.3897/BDJ.9.e76789 oai:zenodo.org:5794779 info:eu-repo/semantics/openAccess Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode Biodiversity Data Journal, 9, e76789, (2021-12-13) occurrence specimen materialCitation funga fungi Mycobiota digitisation biodiversity data mobilisation GBIF info:eu-repo/semantics/article 2021 ftzenodo https://doi.org/10.3897/BDJ.9.e7678910.3897/BDJ.9.e76789.figure110.3897/BDJ.9.e76789.figure210.3897/BDJ.9.e76789.suppl1 2024-07-26T11:29:30Z The paper presents the initiative on literature-based occurrence data mobilisation of fungi and fungi-related organisms (literature-based occurrences, Darwin Core MaterialCitation) to develop the Fungal literature-based occurrence database for the southern West Siberia (FuSWS). The initiative on mobilisation of literature-based occurrence data started in the northern part of West Siberia in 2016. The present project extends the initiative to the southern regions and includes ten administrative territories (Tyumen Region, Sverdlovsk Region, Chelyabinsk Region, Omsk Region, Kurgan Region, Tomsk Region, Novosibirsk Region, Kemerovo Region, Altai Territory and Republic of Altai). The area occupies the central to southern part of the West Siberian Plain and extends for about 1.5 K km from the west to the east from the eastern slopes of the Ural Mountains to Yenisey River and from north to south—about 1.3 K km. The total area equals about 1.4 million km 2 . The initiative is actively growing in spatial, collaboration and data accumulation terms. The working group of about 30 mycologists from eight organisations dedicated to the data mobilisation was created as part of the Siberian Mycological Society (informal organisation since 2019). They have compiled the almost complete bibliographic list of mycology-related papers for the southern West Siberia, including over 900 publications for the last two centuries (the earliest dated 1800). All literature sources were digitised and an online library was created to integrate bibliography metadata and digitised papers using Zotero bibliography manager. The analysis of published sources showed that about two-thirds of works contain occurrences of fungi for the scope of mobilisation. At the time of the paper submission, the database had been populated with a total of about 8 K records from 93 sources. The dataset is uploaded to GBIF, where it is available for online search of species occurrences and/or download. The project's page with the introduction, templates, bibliography ... Article in Journal/Newspaper ural mountains yenisey river Siberia Zenodo Biodiversity Data Journal 9
institution Open Polar
collection Zenodo
op_collection_id ftzenodo
language unknown
topic occurrence
specimen
materialCitation
funga
fungi
Mycobiota
digitisation
biodiversity data mobilisation
GBIF
spellingShingle occurrence
specimen
materialCitation
funga
fungi
Mycobiota
digitisation
biodiversity data mobilisation
GBIF
Filippova, Nina
Ageev, Dmitry
Bolshakov, Sergey
Davydov, Evgeny
Filippova, Aleksandra
Filippov, Ilya
Gashkov, Sergei
Gorbunova, Irina
Kalinina, Ludmila
Kudashova, Nadezhda
Palomozhnykh, Ekaterina
Shabanova, Natalia
Tomoshevich, Maria
Vayshlya, Olga
Vlasenko, Anastasia
Vlasenko, Vyacheslav
Vorob'eva, Irina
Yakovchenko, Lidia
Zvyagina, Elena
The fungal literature-based occurrence database for southern West Siberia (Russia)
topic_facet occurrence
specimen
materialCitation
funga
fungi
Mycobiota
digitisation
biodiversity data mobilisation
GBIF
description The paper presents the initiative on literature-based occurrence data mobilisation of fungi and fungi-related organisms (literature-based occurrences, Darwin Core MaterialCitation) to develop the Fungal literature-based occurrence database for the southern West Siberia (FuSWS). The initiative on mobilisation of literature-based occurrence data started in the northern part of West Siberia in 2016. The present project extends the initiative to the southern regions and includes ten administrative territories (Tyumen Region, Sverdlovsk Region, Chelyabinsk Region, Omsk Region, Kurgan Region, Tomsk Region, Novosibirsk Region, Kemerovo Region, Altai Territory and Republic of Altai). The area occupies the central to southern part of the West Siberian Plain and extends for about 1.5 K km from the west to the east from the eastern slopes of the Ural Mountains to Yenisey River and from north to south—about 1.3 K km. The total area equals about 1.4 million km 2 . The initiative is actively growing in spatial, collaboration and data accumulation terms. The working group of about 30 mycologists from eight organisations dedicated to the data mobilisation was created as part of the Siberian Mycological Society (informal organisation since 2019). They have compiled the almost complete bibliographic list of mycology-related papers for the southern West Siberia, including over 900 publications for the last two centuries (the earliest dated 1800). All literature sources were digitised and an online library was created to integrate bibliography metadata and digitised papers using Zotero bibliography manager. The analysis of published sources showed that about two-thirds of works contain occurrences of fungi for the scope of mobilisation. At the time of the paper submission, the database had been populated with a total of about 8 K records from 93 sources. The dataset is uploaded to GBIF, where it is available for online search of species occurrences and/or download. The project's page with the introduction, templates, bibliography ...
format Article in Journal/Newspaper
author Filippova, Nina
Ageev, Dmitry
Bolshakov, Sergey
Davydov, Evgeny
Filippova, Aleksandra
Filippov, Ilya
Gashkov, Sergei
Gorbunova, Irina
Kalinina, Ludmila
Kudashova, Nadezhda
Palomozhnykh, Ekaterina
Shabanova, Natalia
Tomoshevich, Maria
Vayshlya, Olga
Vlasenko, Anastasia
Vlasenko, Vyacheslav
Vorob'eva, Irina
Yakovchenko, Lidia
Zvyagina, Elena
author_facet Filippova, Nina
Ageev, Dmitry
Bolshakov, Sergey
Davydov, Evgeny
Filippova, Aleksandra
Filippov, Ilya
Gashkov, Sergei
Gorbunova, Irina
Kalinina, Ludmila
Kudashova, Nadezhda
Palomozhnykh, Ekaterina
Shabanova, Natalia
Tomoshevich, Maria
Vayshlya, Olga
Vlasenko, Anastasia
Vlasenko, Vyacheslav
Vorob'eva, Irina
Yakovchenko, Lidia
Zvyagina, Elena
author_sort Filippova, Nina
title The fungal literature-based occurrence database for southern West Siberia (Russia)
title_short The fungal literature-based occurrence database for southern West Siberia (Russia)
title_full The fungal literature-based occurrence database for southern West Siberia (Russia)
title_fullStr The fungal literature-based occurrence database for southern West Siberia (Russia)
title_full_unstemmed The fungal literature-based occurrence database for southern West Siberia (Russia)
title_sort fungal literature-based occurrence database for southern west siberia (russia)
publisher Pensoft Publishers
publishDate 2021
url https://doi.org/10.3897/BDJ.9.e76789
genre ural mountains
yenisey river
Siberia
genre_facet ural mountains
yenisey river
Siberia
op_source Biodiversity Data Journal, 9, e76789, (2021-12-13)
op_relation https://doi.org/10.3897/BDJ.9.e76789.figure1
https://doi.org/10.3897/BDJ.9.e76789.figure2
https://doi.org/10.3897/BDJ.9.e76789.suppl1
https://zenodo.org/communities/biosyslit
https://doi.org/10.3897/BDJ.9.e76789
oai:zenodo.org:5794779
op_rights info:eu-repo/semantics/openAccess
Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
op_doi https://doi.org/10.3897/BDJ.9.e7678910.3897/BDJ.9.e76789.figure110.3897/BDJ.9.e76789.figure210.3897/BDJ.9.e76789.suppl1
container_title Biodiversity Data Journal
container_volume 9
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