Semantic Annotations and Data Integration in Ecology

In order to address society’s most pressing challenges, extremely heterogeneous ecological and organismal data must be integrated. Semantic technology, using terms and design patterns from ontologies and knowledge graphs, provides a more scalable approach than database and spreadsheet technology. In...

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Bibliographic Details
Main Authors: Thessen, Anne E, Schildhauer, Mark, Balk, Meghan A, Mungall, Christopher J
Format: Lecture
Language:unknown
Published: Zenodo 2021
Subjects:
Online Access:https://doi.org/10.5281/zenodo.5104203
Description
Summary:In order to address society’s most pressing challenges, extremely heterogeneous ecological and organismal data must be integrated. Semantic technology, using terms and design patterns from ontologies and knowledge graphs, provides a more scalable approach than database and spreadsheet technology. In this talk, we will discuss the use of semantic technology for ecological data integration in the context of three projects: FuTRES, the Arctic Data Center, and the National Microbiome Data Collaborative. Semantic technology holds great promise for large-scale data integration in ecology, but more work is needed to create a machine-actionable view across data resources. This talk was created for the Ecological Society of America 2021 meeting in an INSPIRE session. These talks are only 5 min long.