Data from: Fifty thousand years of arctic vegetation and megafaunal diet

Although it is generally agreed that the arctic flora is among the youngest and least diverse on Earth, the processes that shaped it are poorly understood. Here we present 50 thousand years (kyr) of arctic vegetation history, derived from the first large-scale ancient DNA metabarcoding study of circ...

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Main Authors: Willerslev, Eske, Davison, John, Moora, Mari, Zobel, Martin, Coissac, Eric, Edwards, Mary E., Lorenzen, Eline D., Vestergård, Mette, Gussarova, Galina, Haile, James, Craine, Joseph, Bergmann, Gaddy, Gielly, Ludovic, Boessenkool, Sanne, Epp, Laura S., Pearman, Peter B., Cheddadi, Rachid, Murray, David, Bråthen, Karri Anne, Yoccoz, Nigel, Binney, Heather, Cruaud, Corinne, Wincker, Patrick, Goslar, Tomasz, Alsos, Inger Greve, Bellemain, Eva, Brysting, Anne Krag, Elven, Reidar, Sønstebø, Jørn Henrik, Murton, Julian, Sher, Andrei, Rasmussen, Morten, Rønn, Regin, Mourier, Tobias, Cooper, Alan, Austin, Jeremy, Möller, Per, Froese, Duane, Zazula, Grant, Pompanon, François, Rioux, Delphine, Niderkorn, Vincent, Tikhonov, Alexei, Savvinov, Grigoriy, Roberts, Richard G., MacPhee, Ross D. E., Gilbert, M. Thomas P., Kjær, Kurt H., Orlando, Ludovic, Brochmann, Christian
Format: Dataset
Language:unknown
Published: 2014
Subjects:
Online Access:https://zenodo.org/record/4968920
https://doi.org/10.5061/dryad.ph8s5
id ftzenodo:oai:zenodo.org:4968920
record_format openpolar
spelling ftzenodo:oai:zenodo.org:4968920 2023-05-15T14:35:35+02:00 Data from: Fifty thousand years of arctic vegetation and megafaunal diet Willerslev, Eske Davison, John Moora, Mari Zobel, Martin Coissac, Eric Edwards, Mary E. Lorenzen, Eline D. Vestergård, Mette Gussarova, Galina Haile, James Craine, Joseph Bergmann, Gaddy Gielly, Ludovic Boessenkool, Sanne Epp, Laura S. Pearman, Peter B. Cheddadi, Rachid Murray, David Bråthen, Karri Anne Yoccoz, Nigel Binney, Heather Cruaud, Corinne Wincker, Patrick Goslar, Tomasz Alsos, Inger Greve Bellemain, Eva Brysting, Anne Krag Elven, Reidar Sønstebø, Jørn Henrik Murton, Julian Sher, Andrei Rasmussen, Morten Rønn, Regin Mourier, Tobias Cooper, Alan Austin, Jeremy Möller, Per Froese, Duane Zazula, Grant Pompanon, François Rioux, Delphine Niderkorn, Vincent Tikhonov, Alexei Savvinov, Grigoriy Roberts, Richard G. MacPhee, Ross D. E. Gilbert, M. Thomas P. Kjær, Kurt H. Orlando, Ludovic Brochmann, Christian 2014-12-02 https://zenodo.org/record/4968920 https://doi.org/10.5061/dryad.ph8s5 unknown doi:10.1038/nature12921 https://zenodo.org/communities/dryad https://zenodo.org/record/4968920 https://doi.org/10.5061/dryad.ph8s5 oai:zenodo.org:4968920 info:eu-repo/semantics/openAccess https://creativecommons.org/publicdomain/zero/1.0/legalcode megafauna extinction Quaternary Ovis aries Ancient environmental DNA Equus lambei Bison sp Mammuthus primigenius Coelodonta antiquitatis info:eu-repo/semantics/other dataset 2014 ftzenodo https://doi.org/10.5061/dryad.ph8s510.1038/nature12921 2023-03-10T14:55:39Z Although it is generally agreed that the arctic flora is among the youngest and least diverse on Earth, the processes that shaped it are poorly understood. Here we present 50 thousand years (kyr) of arctic vegetation history, derived from the first large-scale ancient DNA metabarcoding study of circumpolar plant diversity. For this interval we additionally explore nematode diversity as a proxy for modelling vegetation cover and soil quality, and diets of herbivorous megafaunal mammals, many of which became extinct around 10 kyr BP (before present). For much of the period investigated, arctic vegetation consisted of dry steppe tundra dominated by forbs (non-graminoid herbaceous vascular plants). During the Last Glacial Maximum (25–15 kyr BP), diversity declined markedly, although forbs remained dominant. Much changed after 10 kyr BP, with the appearance of moist tundra dominated by woody plants and graminoids. Our analyses indicate that both graminoids and forbs would have featured in megafaunal diets. As such our findings question the predominance of a late Quaternary graminoid-dominated arctic "mammoth steppe". Sheep diet dataFasta file containing the sequence dataovis_sequence_data.fastaMegafauna diet dataFasta file containing sequence data.megafauna_diet_sequence_data.fastaNematoda sequence dataFasta file containing the raw sequence data.nematoda_sequence_data.fastaNematoda filtered sequence dataFasta file containing the filtered sequence data.nematoda_filtered_sequence_data.fastaMegafauna sequence dataFasta file containing the sequence data.megafauna_sequence_data.fastaMegafauna filtered dataTabulated file containing the filtered data.megafauna_filtered_data.txtSheep diet filtered dataTabulated file containing filtered data of sheep diet.ovis_filtered_data.txtFull permafrost datasetcsv file containing the full permafrost dataset.permafrost.fulldata.csvReference database Arctic (gh)Fasta file of the Arctic reference database (P6 loop of the trnL)references.arctic-gh.fastaReference database Arctic ... Dataset Arctic permafrost Tundra Zenodo Arctic
institution Open Polar
collection Zenodo
op_collection_id ftzenodo
language unknown
topic megafauna extinction
Quaternary
Ovis aries
Ancient environmental DNA
Equus lambei
Bison sp
Mammuthus primigenius
Coelodonta antiquitatis
spellingShingle megafauna extinction
Quaternary
Ovis aries
Ancient environmental DNA
Equus lambei
Bison sp
Mammuthus primigenius
Coelodonta antiquitatis
Willerslev, Eske
Davison, John
Moora, Mari
Zobel, Martin
Coissac, Eric
Edwards, Mary E.
Lorenzen, Eline D.
Vestergård, Mette
Gussarova, Galina
Haile, James
Craine, Joseph
Bergmann, Gaddy
Gielly, Ludovic
Boessenkool, Sanne
Epp, Laura S.
Pearman, Peter B.
Cheddadi, Rachid
Murray, David
Bråthen, Karri Anne
Yoccoz, Nigel
Binney, Heather
Cruaud, Corinne
Wincker, Patrick
Goslar, Tomasz
Alsos, Inger Greve
Bellemain, Eva
Brysting, Anne Krag
Elven, Reidar
Sønstebø, Jørn Henrik
Murton, Julian
Sher, Andrei
Rasmussen, Morten
Rønn, Regin
Mourier, Tobias
Cooper, Alan
Austin, Jeremy
Möller, Per
Froese, Duane
Zazula, Grant
Pompanon, François
Rioux, Delphine
Niderkorn, Vincent
Tikhonov, Alexei
Savvinov, Grigoriy
Roberts, Richard G.
MacPhee, Ross D. E.
Gilbert, M. Thomas P.
Kjær, Kurt H.
Orlando, Ludovic
Brochmann, Christian
Data from: Fifty thousand years of arctic vegetation and megafaunal diet
topic_facet megafauna extinction
Quaternary
Ovis aries
Ancient environmental DNA
Equus lambei
Bison sp
Mammuthus primigenius
Coelodonta antiquitatis
description Although it is generally agreed that the arctic flora is among the youngest and least diverse on Earth, the processes that shaped it are poorly understood. Here we present 50 thousand years (kyr) of arctic vegetation history, derived from the first large-scale ancient DNA metabarcoding study of circumpolar plant diversity. For this interval we additionally explore nematode diversity as a proxy for modelling vegetation cover and soil quality, and diets of herbivorous megafaunal mammals, many of which became extinct around 10 kyr BP (before present). For much of the period investigated, arctic vegetation consisted of dry steppe tundra dominated by forbs (non-graminoid herbaceous vascular plants). During the Last Glacial Maximum (25–15 kyr BP), diversity declined markedly, although forbs remained dominant. Much changed after 10 kyr BP, with the appearance of moist tundra dominated by woody plants and graminoids. Our analyses indicate that both graminoids and forbs would have featured in megafaunal diets. As such our findings question the predominance of a late Quaternary graminoid-dominated arctic "mammoth steppe". Sheep diet dataFasta file containing the sequence dataovis_sequence_data.fastaMegafauna diet dataFasta file containing sequence data.megafauna_diet_sequence_data.fastaNematoda sequence dataFasta file containing the raw sequence data.nematoda_sequence_data.fastaNematoda filtered sequence dataFasta file containing the filtered sequence data.nematoda_filtered_sequence_data.fastaMegafauna sequence dataFasta file containing the sequence data.megafauna_sequence_data.fastaMegafauna filtered dataTabulated file containing the filtered data.megafauna_filtered_data.txtSheep diet filtered dataTabulated file containing filtered data of sheep diet.ovis_filtered_data.txtFull permafrost datasetcsv file containing the full permafrost dataset.permafrost.fulldata.csvReference database Arctic (gh)Fasta file of the Arctic reference database (P6 loop of the trnL)references.arctic-gh.fastaReference database Arctic ...
format Dataset
author Willerslev, Eske
Davison, John
Moora, Mari
Zobel, Martin
Coissac, Eric
Edwards, Mary E.
Lorenzen, Eline D.
Vestergård, Mette
Gussarova, Galina
Haile, James
Craine, Joseph
Bergmann, Gaddy
Gielly, Ludovic
Boessenkool, Sanne
Epp, Laura S.
Pearman, Peter B.
Cheddadi, Rachid
Murray, David
Bråthen, Karri Anne
Yoccoz, Nigel
Binney, Heather
Cruaud, Corinne
Wincker, Patrick
Goslar, Tomasz
Alsos, Inger Greve
Bellemain, Eva
Brysting, Anne Krag
Elven, Reidar
Sønstebø, Jørn Henrik
Murton, Julian
Sher, Andrei
Rasmussen, Morten
Rønn, Regin
Mourier, Tobias
Cooper, Alan
Austin, Jeremy
Möller, Per
Froese, Duane
Zazula, Grant
Pompanon, François
Rioux, Delphine
Niderkorn, Vincent
Tikhonov, Alexei
Savvinov, Grigoriy
Roberts, Richard G.
MacPhee, Ross D. E.
Gilbert, M. Thomas P.
Kjær, Kurt H.
Orlando, Ludovic
Brochmann, Christian
author_facet Willerslev, Eske
Davison, John
Moora, Mari
Zobel, Martin
Coissac, Eric
Edwards, Mary E.
Lorenzen, Eline D.
Vestergård, Mette
Gussarova, Galina
Haile, James
Craine, Joseph
Bergmann, Gaddy
Gielly, Ludovic
Boessenkool, Sanne
Epp, Laura S.
Pearman, Peter B.
Cheddadi, Rachid
Murray, David
Bråthen, Karri Anne
Yoccoz, Nigel
Binney, Heather
Cruaud, Corinne
Wincker, Patrick
Goslar, Tomasz
Alsos, Inger Greve
Bellemain, Eva
Brysting, Anne Krag
Elven, Reidar
Sønstebø, Jørn Henrik
Murton, Julian
Sher, Andrei
Rasmussen, Morten
Rønn, Regin
Mourier, Tobias
Cooper, Alan
Austin, Jeremy
Möller, Per
Froese, Duane
Zazula, Grant
Pompanon, François
Rioux, Delphine
Niderkorn, Vincent
Tikhonov, Alexei
Savvinov, Grigoriy
Roberts, Richard G.
MacPhee, Ross D. E.
Gilbert, M. Thomas P.
Kjær, Kurt H.
Orlando, Ludovic
Brochmann, Christian
author_sort Willerslev, Eske
title Data from: Fifty thousand years of arctic vegetation and megafaunal diet
title_short Data from: Fifty thousand years of arctic vegetation and megafaunal diet
title_full Data from: Fifty thousand years of arctic vegetation and megafaunal diet
title_fullStr Data from: Fifty thousand years of arctic vegetation and megafaunal diet
title_full_unstemmed Data from: Fifty thousand years of arctic vegetation and megafaunal diet
title_sort data from: fifty thousand years of arctic vegetation and megafaunal diet
publishDate 2014
url https://zenodo.org/record/4968920
https://doi.org/10.5061/dryad.ph8s5
geographic Arctic
geographic_facet Arctic
genre Arctic
permafrost
Tundra
genre_facet Arctic
permafrost
Tundra
op_relation doi:10.1038/nature12921
https://zenodo.org/communities/dryad
https://zenodo.org/record/4968920
https://doi.org/10.5061/dryad.ph8s5
oai:zenodo.org:4968920
op_rights info:eu-repo/semantics/openAccess
https://creativecommons.org/publicdomain/zero/1.0/legalcode
op_doi https://doi.org/10.5061/dryad.ph8s510.1038/nature12921
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