Data from: Deep sequencing of the olfactory epithelium reveals specific chemosensory receptors are expressed at sexual maturity in the European eel Anguilla anguilla

Vertebrate genomes encode a diversity of G protein-coupled receptors (GPCR) that belong to large gene families and are used by olfactory systems to detect chemical cues found in the environment. It is not clear however, if individual receptors from these large gene families have evolved roles that a...

Full description

Bibliographic Details
Main Authors: Churcher, Allison M., Hubbard, Peter C., Marques, João P., Canário, Adelino V. M., Huertas, Mar
Format: Other/Unknown Material
Language:unknown
Published: Zenodo 2015
Subjects:
Online Access:https://doi.org/10.5061/dryad.qp578
_version_ 1821491428559159296
author Churcher, Allison M.
Hubbard, Peter C.
Marques, João P.
Canário, Adelino V. M.
Huertas, Mar
author_facet Churcher, Allison M.
Hubbard, Peter C.
Marques, João P.
Canário, Adelino V. M.
Huertas, Mar
author_sort Churcher, Allison M.
collection Zenodo
description Vertebrate genomes encode a diversity of G protein-coupled receptors (GPCR) that belong to large gene families and are used by olfactory systems to detect chemical cues found in the environment. It is not clear however, if individual receptors from these large gene families have evolved roles that are specific to certain life stages. Here, we used deep sequencing to identify differentially expressed receptor transcripts in the olfactory epithelia (OE) of freshwater, seawater and sexually mature male eels (Anguilla anguilla). This species is particularly intriguing because of its complex life cycle, extreme long distance migrations and early-branching position within the teleost phylogeny. In the A. anguilla OE, we identified full-length transcripts for 13, 112, 6 and 38 trace-amine associated receptors (TAAR), odorant receptors (OR) and type I and type II vomeronasal receptors (V1R and V2R). Most of these receptors were expressed at similar levels at different life stages and that a subset of OR and V2R-like transcripts were more abundant in sexually mature males suggesting that ORs and V2R-like genes are important for reproduction. We also identified a set of GPCR signal transduction genes that were differentially expressed indicating that eels make use of different GPCR signal transduction genes at different life stages. The finding that a diversity of chemosensory receptors are expressed in the olfactory epithelium and that a subset are differentially expressed suggest that most receptors belonging to large chemosensory gene families have functions that are important at multiple life stages while a subset have evolved specific functions at different life stages. Aanguilla olfactory epithelium transcriptome assembly This is the Trinity assembled olfactory epithelium transcriptome (Illiumna HiSeq 2000) for Anguilla anguilla. Aanguilla_olfactory_epithelium_transcriptome_assembly.fasta Aanguilla_olfactory_expression_data These are the expression data for the olfactory epithelium of freshwater (FW), seawater ...
format Other/Unknown Material
genre Anguilla anguilla
European eel
genre_facet Anguilla anguilla
European eel
id ftzenodo:oai:zenodo.org:4956074
institution Open Polar
language unknown
op_collection_id ftzenodo
op_doi https://doi.org/10.5061/dryad.qp57810.1111/mec.13065
op_relation https://doi.org/10.1111/mec.13065
https://zenodo.org/communities/dryad
https://doi.org/10.5061/dryad.qp578
oai:zenodo.org:4956074
op_rights info:eu-repo/semantics/openAccess
Creative Commons Zero v1.0 Universal
https://creativecommons.org/publicdomain/zero/1.0/legalcode
publishDate 2015
publisher Zenodo
record_format openpolar
spelling ftzenodo:oai:zenodo.org:4956074 2025-01-16T18:57:10+00:00 Data from: Deep sequencing of the olfactory epithelium reveals specific chemosensory receptors are expressed at sexual maturity in the European eel Anguilla anguilla Churcher, Allison M. Hubbard, Peter C. Marques, João P. Canário, Adelino V. M. Huertas, Mar 2015-01-06 https://doi.org/10.5061/dryad.qp578 unknown Zenodo https://doi.org/10.1111/mec.13065 https://zenodo.org/communities/dryad https://doi.org/10.5061/dryad.qp578 oai:zenodo.org:4956074 info:eu-repo/semantics/openAccess Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode Anguilla anguilla olfactory epithelium olfactory receptors info:eu-repo/semantics/other 2015 ftzenodo https://doi.org/10.5061/dryad.qp57810.1111/mec.13065 2024-12-05T03:45:34Z Vertebrate genomes encode a diversity of G protein-coupled receptors (GPCR) that belong to large gene families and are used by olfactory systems to detect chemical cues found in the environment. It is not clear however, if individual receptors from these large gene families have evolved roles that are specific to certain life stages. Here, we used deep sequencing to identify differentially expressed receptor transcripts in the olfactory epithelia (OE) of freshwater, seawater and sexually mature male eels (Anguilla anguilla). This species is particularly intriguing because of its complex life cycle, extreme long distance migrations and early-branching position within the teleost phylogeny. In the A. anguilla OE, we identified full-length transcripts for 13, 112, 6 and 38 trace-amine associated receptors (TAAR), odorant receptors (OR) and type I and type II vomeronasal receptors (V1R and V2R). Most of these receptors were expressed at similar levels at different life stages and that a subset of OR and V2R-like transcripts were more abundant in sexually mature males suggesting that ORs and V2R-like genes are important for reproduction. We also identified a set of GPCR signal transduction genes that were differentially expressed indicating that eels make use of different GPCR signal transduction genes at different life stages. The finding that a diversity of chemosensory receptors are expressed in the olfactory epithelium and that a subset are differentially expressed suggest that most receptors belonging to large chemosensory gene families have functions that are important at multiple life stages while a subset have evolved specific functions at different life stages. Aanguilla olfactory epithelium transcriptome assembly This is the Trinity assembled olfactory epithelium transcriptome (Illiumna HiSeq 2000) for Anguilla anguilla. Aanguilla_olfactory_epithelium_transcriptome_assembly.fasta Aanguilla_olfactory_expression_data These are the expression data for the olfactory epithelium of freshwater (FW), seawater ... Other/Unknown Material Anguilla anguilla European eel Zenodo
spellingShingle Anguilla anguilla
olfactory epithelium
olfactory receptors
Churcher, Allison M.
Hubbard, Peter C.
Marques, João P.
Canário, Adelino V. M.
Huertas, Mar
Data from: Deep sequencing of the olfactory epithelium reveals specific chemosensory receptors are expressed at sexual maturity in the European eel Anguilla anguilla
title Data from: Deep sequencing of the olfactory epithelium reveals specific chemosensory receptors are expressed at sexual maturity in the European eel Anguilla anguilla
title_full Data from: Deep sequencing of the olfactory epithelium reveals specific chemosensory receptors are expressed at sexual maturity in the European eel Anguilla anguilla
title_fullStr Data from: Deep sequencing of the olfactory epithelium reveals specific chemosensory receptors are expressed at sexual maturity in the European eel Anguilla anguilla
title_full_unstemmed Data from: Deep sequencing of the olfactory epithelium reveals specific chemosensory receptors are expressed at sexual maturity in the European eel Anguilla anguilla
title_short Data from: Deep sequencing of the olfactory epithelium reveals specific chemosensory receptors are expressed at sexual maturity in the European eel Anguilla anguilla
title_sort data from: deep sequencing of the olfactory epithelium reveals specific chemosensory receptors are expressed at sexual maturity in the european eel anguilla anguilla
topic Anguilla anguilla
olfactory epithelium
olfactory receptors
topic_facet Anguilla anguilla
olfactory epithelium
olfactory receptors
url https://doi.org/10.5061/dryad.qp578