Data from: Phylogeography of a widespread eastern North American shrub, Viburnum lantanoides

Premise of the Study: There have been relatively few phylogeographic studies of eastern North American plants, especially of animal‐dispersed shrubby species, and this leaves a significant gap in our understanding of how such species were affected by glacial events. Here, we analyzed the phylogeogra...

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Main Authors: Park, Brian, Donoghue, Michael J.
Format: Dataset
Language:unknown
Published: 2021
Subjects:
Online Access:https://zenodo.org/record/4954907
https://doi.org/10.5061/dryad.1748225
id ftzenodo:oai:zenodo.org:4954907
record_format openpolar
spelling ftzenodo:oai:zenodo.org:4954907 2023-06-06T11:53:59+02:00 Data from: Phylogeography of a widespread eastern North American shrub, Viburnum lantanoides Park, Brian Donoghue, Michael J. 2021-06-28 https://zenodo.org/record/4954907 https://doi.org/10.5061/dryad.1748225 unknown doi:10.1002/ajb2.1248 https://www.ncbi.nlm.nih.gov/nuccore/.%2Fbioproject%2F%3Fterm%3DPRJNA507304 https://zenodo.org/communities/dryad https://zenodo.org/record/4954907 https://doi.org/10.5061/dryad.1748225 oai:zenodo.org:4954907 info:eu-repo/semantics/openAccess https://creativecommons.org/publicdomain/zero/1.0/legalcode Last Glacial Maximum - Current Viburnum lantanoides info:eu-repo/semantics/other dataset 2021 ftzenodo https://doi.org/10.5061/dryad.174822510.1002/ajb2.1248 2023-04-13T21:20:20Z Premise of the Study: There have been relatively few phylogeographic studies of eastern North American plants, especially of animal‐dispersed shrubby species, and this leaves a significant gap in our understanding of how such species were affected by glacial events. Here, we analyzed the phylogeography of the widespread understory shrub Viburnum lantanoides. Methods: We generated RADseq data and paleoclimatic species distribution models (SDMs) to identify the locations of refugia where V. lantanoides may have survived the Last Glacial Maximum (LGM) and how its range expanded as glaciers receded. Key Results: Genetic diversity falls off with increasing latitude and longitude, indicating that range expansion likely occurred via serial founder events from southern source populations. Samples from the southern Appalachians form a grade, while those from the north form a clade, suggesting that a single genetic lineage recolonized the north. SDMs indicate that V. lantanoides probably survived the LGM in refugia on the mid‐Atlantic Coastal Plain and/or the interior Gulf Coastal Plain. Conclusions: Our analyses indicate that V. lantanoides survived the LGM in refugia south of the glacier but north of the extensive refugium along the Gulf Coast. Following the LGM, a single population expanded northward along the Appalachian Mountains and eventually into eastern Canada. The patterns observed here suggest that range expansion occurred in a stepwise manner, similar to postglacial dynamics observed in a number of European plant species. Data used to generate distribution models in maxent This file contains the GPS coordinates of populations of V. lantanoides that were observed by the author (B. Park) during collecting expeditions. These data were used to generate species distribution models in maxent. V_LANTANOIDES_MAXENT.csv Results from population genetic analyses This file contains heterozygosity estimates as well as ancestry coefficients estimated using sNMF, tess3R, and DAPC. It also contains PCA scores for PC axes 1, ... Dataset glacier* Zenodo Canada
institution Open Polar
collection Zenodo
op_collection_id ftzenodo
language unknown
topic Last Glacial Maximum - Current
Viburnum lantanoides
spellingShingle Last Glacial Maximum - Current
Viburnum lantanoides
Park, Brian
Donoghue, Michael J.
Data from: Phylogeography of a widespread eastern North American shrub, Viburnum lantanoides
topic_facet Last Glacial Maximum - Current
Viburnum lantanoides
description Premise of the Study: There have been relatively few phylogeographic studies of eastern North American plants, especially of animal‐dispersed shrubby species, and this leaves a significant gap in our understanding of how such species were affected by glacial events. Here, we analyzed the phylogeography of the widespread understory shrub Viburnum lantanoides. Methods: We generated RADseq data and paleoclimatic species distribution models (SDMs) to identify the locations of refugia where V. lantanoides may have survived the Last Glacial Maximum (LGM) and how its range expanded as glaciers receded. Key Results: Genetic diversity falls off with increasing latitude and longitude, indicating that range expansion likely occurred via serial founder events from southern source populations. Samples from the southern Appalachians form a grade, while those from the north form a clade, suggesting that a single genetic lineage recolonized the north. SDMs indicate that V. lantanoides probably survived the LGM in refugia on the mid‐Atlantic Coastal Plain and/or the interior Gulf Coastal Plain. Conclusions: Our analyses indicate that V. lantanoides survived the LGM in refugia south of the glacier but north of the extensive refugium along the Gulf Coast. Following the LGM, a single population expanded northward along the Appalachian Mountains and eventually into eastern Canada. The patterns observed here suggest that range expansion occurred in a stepwise manner, similar to postglacial dynamics observed in a number of European plant species. Data used to generate distribution models in maxent This file contains the GPS coordinates of populations of V. lantanoides that were observed by the author (B. Park) during collecting expeditions. These data were used to generate species distribution models in maxent. V_LANTANOIDES_MAXENT.csv Results from population genetic analyses This file contains heterozygosity estimates as well as ancestry coefficients estimated using sNMF, tess3R, and DAPC. It also contains PCA scores for PC axes 1, ...
format Dataset
author Park, Brian
Donoghue, Michael J.
author_facet Park, Brian
Donoghue, Michael J.
author_sort Park, Brian
title Data from: Phylogeography of a widespread eastern North American shrub, Viburnum lantanoides
title_short Data from: Phylogeography of a widespread eastern North American shrub, Viburnum lantanoides
title_full Data from: Phylogeography of a widespread eastern North American shrub, Viburnum lantanoides
title_fullStr Data from: Phylogeography of a widespread eastern North American shrub, Viburnum lantanoides
title_full_unstemmed Data from: Phylogeography of a widespread eastern North American shrub, Viburnum lantanoides
title_sort data from: phylogeography of a widespread eastern north american shrub, viburnum lantanoides
publishDate 2021
url https://zenodo.org/record/4954907
https://doi.org/10.5061/dryad.1748225
geographic Canada
geographic_facet Canada
genre glacier*
genre_facet glacier*
op_relation doi:10.1002/ajb2.1248
https://www.ncbi.nlm.nih.gov/nuccore/.%2Fbioproject%2F%3Fterm%3DPRJNA507304
https://zenodo.org/communities/dryad
https://zenodo.org/record/4954907
https://doi.org/10.5061/dryad.1748225
oai:zenodo.org:4954907
op_rights info:eu-repo/semantics/openAccess
https://creativecommons.org/publicdomain/zero/1.0/legalcode
op_doi https://doi.org/10.5061/dryad.174822510.1002/ajb2.1248
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