Data from: A submersible, off-axis holographic microscope for detection of microbial motility and morphology in aqueous and icy environments
Sea ice is an analog environment for several of astrobiology's near-term targets: Mars, Europa, Enceladus, and perhaps other Jovian or Saturnian moons. Microorganisms, both eukaryotic and prokaryotic, remain active within brine channels inside the ice, making it unnecessary to penetrate through...
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ftzenodo:oai:zenodo.org:4937128 2023-05-15T16:30:31+02:00 Data from: A submersible, off-axis holographic microscope for detection of microbial motility and morphology in aqueous and icy environments Lindensmith, Christian A. Rider, Stephanie Bedrossian, Manuel Wallace, J. Kent Serabyn, Eugene Showalter, Gordon M. Deming, Jody W. Nadeau, Jay L. 2017-01-16 https://zenodo.org/record/4937128 https://doi.org/10.5061/dryad.rc63v unknown doi:10.1371/journal.pone.0147700 https://zenodo.org/communities/dryad https://zenodo.org/record/4937128 https://doi.org/10.5061/dryad.rc63v oai:zenodo.org:4937128 info:eu-repo/semantics/openAccess https://creativecommons.org/publicdomain/zero/1.0/legalcode astrobiology sea ice motility marine microorganisms Holocene info:eu-repo/semantics/other dataset 2017 ftzenodo https://doi.org/10.5061/dryad.rc63v10.1371/journal.pone.0147700 2023-03-11T02:10:11Z Sea ice is an analog environment for several of astrobiology's near-term targets: Mars, Europa, Enceladus, and perhaps other Jovian or Saturnian moons. Microorganisms, both eukaryotic and prokaryotic, remain active within brine channels inside the ice, making it unnecessary to penetrate through to liquid water below in order to detect life. We have developed a submersible digital holographic microscope (DHM) that is capable of resolving individual bacterial cells, and demonstrated its utility for immediately imaging samples taken directly from sea ice at several locations near Nuuk, Greenland. In all samples, the appearance and motility of eukaryotes were conclusive signs of life. The appearance of prokaryotic cells alone was not sufficient to confirm life, but when prokaryotic motility occurred, it was rapid and conclusive. Warming the samples to above-freezing temperatures or supplementing with serine increased the number of motile cells and the speed of motility; supplementing with serine also stimulated chemotaxis. These results show that DHM is a useful technique for detection of active organisms in extreme environments, and that motility may be used as a biosignature in the liquid brines that persist in ice. These findings have important implications for the design of missions to icy environments and suggest ways in which DHM imaging may be integrated with chemical life-detection suites in order to create more conclusive life detection packages. Chemotaxis Middle ChamberHolograms of Malene Bay brine sample exposed to a bottom-to-top serine gradient (data file 2015.03.30 06-28) Data for Fig. 9 B, C in paper and Video S9.Holograms.zipChemotaxis Side ChamberBrine sample exposed to a right-to-left serine gradient. Data file 2015.03.30 06-14. Data for Fig. 9 A in paper.201503300614.zipSeawater at +4CMalene Bay seawater kept overnight at +4 C with the addition of 1/2 strength 2216 marine medium. File 2015.03.30 05-58. Data for Figures 7 and 8E in paper and Videos 4 and 7.201503300558.zipBrine at +4 CMalene Bay ... Dataset Greenland Nuuk Sea ice Zenodo Greenland Nuuk ENVELOPE(-52.150,-52.150,68.717,68.717) |
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unknown |
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astrobiology sea ice motility marine microorganisms Holocene |
spellingShingle |
astrobiology sea ice motility marine microorganisms Holocene Lindensmith, Christian A. Rider, Stephanie Bedrossian, Manuel Wallace, J. Kent Serabyn, Eugene Showalter, Gordon M. Deming, Jody W. Nadeau, Jay L. Data from: A submersible, off-axis holographic microscope for detection of microbial motility and morphology in aqueous and icy environments |
topic_facet |
astrobiology sea ice motility marine microorganisms Holocene |
description |
Sea ice is an analog environment for several of astrobiology's near-term targets: Mars, Europa, Enceladus, and perhaps other Jovian or Saturnian moons. Microorganisms, both eukaryotic and prokaryotic, remain active within brine channels inside the ice, making it unnecessary to penetrate through to liquid water below in order to detect life. We have developed a submersible digital holographic microscope (DHM) that is capable of resolving individual bacterial cells, and demonstrated its utility for immediately imaging samples taken directly from sea ice at several locations near Nuuk, Greenland. In all samples, the appearance and motility of eukaryotes were conclusive signs of life. The appearance of prokaryotic cells alone was not sufficient to confirm life, but when prokaryotic motility occurred, it was rapid and conclusive. Warming the samples to above-freezing temperatures or supplementing with serine increased the number of motile cells and the speed of motility; supplementing with serine also stimulated chemotaxis. These results show that DHM is a useful technique for detection of active organisms in extreme environments, and that motility may be used as a biosignature in the liquid brines that persist in ice. These findings have important implications for the design of missions to icy environments and suggest ways in which DHM imaging may be integrated with chemical life-detection suites in order to create more conclusive life detection packages. Chemotaxis Middle ChamberHolograms of Malene Bay brine sample exposed to a bottom-to-top serine gradient (data file 2015.03.30 06-28) Data for Fig. 9 B, C in paper and Video S9.Holograms.zipChemotaxis Side ChamberBrine sample exposed to a right-to-left serine gradient. Data file 2015.03.30 06-14. Data for Fig. 9 A in paper.201503300614.zipSeawater at +4CMalene Bay seawater kept overnight at +4 C with the addition of 1/2 strength 2216 marine medium. File 2015.03.30 05-58. Data for Figures 7 and 8E in paper and Videos 4 and 7.201503300558.zipBrine at +4 CMalene Bay ... |
format |
Dataset |
author |
Lindensmith, Christian A. Rider, Stephanie Bedrossian, Manuel Wallace, J. Kent Serabyn, Eugene Showalter, Gordon M. Deming, Jody W. Nadeau, Jay L. |
author_facet |
Lindensmith, Christian A. Rider, Stephanie Bedrossian, Manuel Wallace, J. Kent Serabyn, Eugene Showalter, Gordon M. Deming, Jody W. Nadeau, Jay L. |
author_sort |
Lindensmith, Christian A. |
title |
Data from: A submersible, off-axis holographic microscope for detection of microbial motility and morphology in aqueous and icy environments |
title_short |
Data from: A submersible, off-axis holographic microscope for detection of microbial motility and morphology in aqueous and icy environments |
title_full |
Data from: A submersible, off-axis holographic microscope for detection of microbial motility and morphology in aqueous and icy environments |
title_fullStr |
Data from: A submersible, off-axis holographic microscope for detection of microbial motility and morphology in aqueous and icy environments |
title_full_unstemmed |
Data from: A submersible, off-axis holographic microscope for detection of microbial motility and morphology in aqueous and icy environments |
title_sort |
data from: a submersible, off-axis holographic microscope for detection of microbial motility and morphology in aqueous and icy environments |
publishDate |
2017 |
url |
https://zenodo.org/record/4937128 https://doi.org/10.5061/dryad.rc63v |
long_lat |
ENVELOPE(-52.150,-52.150,68.717,68.717) |
geographic |
Greenland Nuuk |
geographic_facet |
Greenland Nuuk |
genre |
Greenland Nuuk Sea ice |
genre_facet |
Greenland Nuuk Sea ice |
op_relation |
doi:10.1371/journal.pone.0147700 https://zenodo.org/communities/dryad https://zenodo.org/record/4937128 https://doi.org/10.5061/dryad.rc63v oai:zenodo.org:4937128 |
op_rights |
info:eu-repo/semantics/openAccess https://creativecommons.org/publicdomain/zero/1.0/legalcode |
op_doi |
https://doi.org/10.5061/dryad.rc63v10.1371/journal.pone.0147700 |
_version_ |
1766020242572574720 |