Data from: AFLPs and mitochondrial haplotypes reveal local adaptation to extreme thermal environments in a freshwater gastropod

The way environmental variation shapes neutral and adaptive genetic variation in natural populations is a key issue in evolutionary biology. Genome scans allow the identification of the genetic basis of local adaptation without previous knowledge of genetic variation or traits under selection. Candi...

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Main Authors: Quintela, María, Johansson, Magnus P., Kristjánsson, Bjarni K., Barreiro, Rodolfo, Laurila, Anssi
Format: Other/Unknown Material
Language:unknown
Published: Zenodo 2015
Subjects:
Online Access:https://doi.org/10.5061/dryad.3nd75
id ftzenodo:oai:zenodo.org:4934424
record_format openpolar
spelling ftzenodo:oai:zenodo.org:4934424 2024-09-15T18:14:21+00:00 Data from: AFLPs and mitochondrial haplotypes reveal local adaptation to extreme thermal environments in a freshwater gastropod Quintela, María Johansson, Magnus P. Kristjánsson, Bjarni K. Barreiro, Rodolfo Laurila, Anssi 2015-05-27 https://doi.org/10.5061/dryad.3nd75 unknown Zenodo https://doi.org/10.1371/journal.pone.0101821 https://zenodo.org/communities/dryad https://doi.org/10.5061/dryad.3nd75 oai:zenodo.org:4934424 info:eu-repo/semantics/openAccess Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode AFLP Radix balthica present thermal habitat info:eu-repo/semantics/other 2015 ftzenodo https://doi.org/10.5061/dryad.3nd7510.1371/journal.pone.0101821 2024-07-26T11:46:36Z The way environmental variation shapes neutral and adaptive genetic variation in natural populations is a key issue in evolutionary biology. Genome scans allow the identification of the genetic basis of local adaptation without previous knowledge of genetic variation or traits under selection. Candidate loci for divergent adaptation are expected to show higher FST than neutral loci influenced solely by random genetic drift, migration and mutation. The comparison of spatial patterns of neutral markers and loci under selection may help disentangle the effects of gene flow, genetic drift and selection among populations living in contrasting environments. Using the gastropod Radix balthica as a system, we analyzed 376 AFLP markers and 25 mtDNA COI haplotypes for candidate loci and associations with local adaptation among contrasting thermal environments in Lake Mývatn, a volcanic lake in northern Iceland. We found that 2% of the analysed AFLP markers were under directional selection and 12% of the mitochondrial haplotypes correlated with differing thermal habitats. The genetic networks were concordant for AFLP markers and mitochondrial haplotypes, depicting distinct topologies at neutral and candidate loci. Neutral topologies were characterized by intense gene flow revealed by dense nets with edges connecting contrasting thermal habitats, whereas the connections at candidate loci were mostly restricted to populations within each thermal habitat and the number of edges decreased with temperature. Our results suggest microgeographic adaptation within Lake Mývatn and highlight the utility of genome scans in detecting adaptive divergence. Lake Mývatn_Radix balthica AFLPs Other/Unknown Material Iceland Mývatn Zenodo
institution Open Polar
collection Zenodo
op_collection_id ftzenodo
language unknown
topic AFLP
Radix balthica
present
thermal habitat
spellingShingle AFLP
Radix balthica
present
thermal habitat
Quintela, María
Johansson, Magnus P.
Kristjánsson, Bjarni K.
Barreiro, Rodolfo
Laurila, Anssi
Data from: AFLPs and mitochondrial haplotypes reveal local adaptation to extreme thermal environments in a freshwater gastropod
topic_facet AFLP
Radix balthica
present
thermal habitat
description The way environmental variation shapes neutral and adaptive genetic variation in natural populations is a key issue in evolutionary biology. Genome scans allow the identification of the genetic basis of local adaptation without previous knowledge of genetic variation or traits under selection. Candidate loci for divergent adaptation are expected to show higher FST than neutral loci influenced solely by random genetic drift, migration and mutation. The comparison of spatial patterns of neutral markers and loci under selection may help disentangle the effects of gene flow, genetic drift and selection among populations living in contrasting environments. Using the gastropod Radix balthica as a system, we analyzed 376 AFLP markers and 25 mtDNA COI haplotypes for candidate loci and associations with local adaptation among contrasting thermal environments in Lake Mývatn, a volcanic lake in northern Iceland. We found that 2% of the analysed AFLP markers were under directional selection and 12% of the mitochondrial haplotypes correlated with differing thermal habitats. The genetic networks were concordant for AFLP markers and mitochondrial haplotypes, depicting distinct topologies at neutral and candidate loci. Neutral topologies were characterized by intense gene flow revealed by dense nets with edges connecting contrasting thermal habitats, whereas the connections at candidate loci were mostly restricted to populations within each thermal habitat and the number of edges decreased with temperature. Our results suggest microgeographic adaptation within Lake Mývatn and highlight the utility of genome scans in detecting adaptive divergence. Lake Mývatn_Radix balthica AFLPs
format Other/Unknown Material
author Quintela, María
Johansson, Magnus P.
Kristjánsson, Bjarni K.
Barreiro, Rodolfo
Laurila, Anssi
author_facet Quintela, María
Johansson, Magnus P.
Kristjánsson, Bjarni K.
Barreiro, Rodolfo
Laurila, Anssi
author_sort Quintela, María
title Data from: AFLPs and mitochondrial haplotypes reveal local adaptation to extreme thermal environments in a freshwater gastropod
title_short Data from: AFLPs and mitochondrial haplotypes reveal local adaptation to extreme thermal environments in a freshwater gastropod
title_full Data from: AFLPs and mitochondrial haplotypes reveal local adaptation to extreme thermal environments in a freshwater gastropod
title_fullStr Data from: AFLPs and mitochondrial haplotypes reveal local adaptation to extreme thermal environments in a freshwater gastropod
title_full_unstemmed Data from: AFLPs and mitochondrial haplotypes reveal local adaptation to extreme thermal environments in a freshwater gastropod
title_sort data from: aflps and mitochondrial haplotypes reveal local adaptation to extreme thermal environments in a freshwater gastropod
publisher Zenodo
publishDate 2015
url https://doi.org/10.5061/dryad.3nd75
genre Iceland
Mývatn
genre_facet Iceland
Mývatn
op_relation https://doi.org/10.1371/journal.pone.0101821
https://zenodo.org/communities/dryad
https://doi.org/10.5061/dryad.3nd75
oai:zenodo.org:4934424
op_rights info:eu-repo/semantics/openAccess
Creative Commons Zero v1.0 Universal
https://creativecommons.org/publicdomain/zero/1.0/legalcode
op_doi https://doi.org/10.5061/dryad.3nd7510.1371/journal.pone.0101821
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