Data from: Cross-species screening of microsatellite markers for individual identification of snow petrel Pagodroma nivea and Wilson's storm petrel Oceanites oceanicus in Antarctica

Seabirds are important indicators of marine ecosystem health. Species within the order Procellariiformes are the most abundant seabird species group distributed from warm tropical to cold temperate regions including Antarctica. There is a paucity of information on basic biology of the pelagic seabir...

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Main Authors: Pande, Anant, Rawat, Nidhi, Sivakumar, Kuppusamy, Sathyakumar, Sambandam, Mathur, Vinod B., Mondol, Samrat
Format: Other/Unknown Material
Language:unknown
Published: Zenodo 2019
Subjects:
Online Access:https://doi.org/10.5061/dryad.57027hc
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author Pande, Anant
Rawat, Nidhi
Sivakumar, Kuppusamy
Sathyakumar, Sambandam
Mathur, Vinod B.
Mondol, Samrat
author_facet Pande, Anant
Rawat, Nidhi
Sivakumar, Kuppusamy
Sathyakumar, Sambandam
Mathur, Vinod B.
Mondol, Samrat
author_sort Pande, Anant
collection Zenodo
description Seabirds are important indicators of marine ecosystem health. Species within the order Procellariiformes are the most abundant seabird species group distributed from warm tropical to cold temperate regions including Antarctica. There is a paucity of information on basic biology of the pelagic seabird species nesting on the Antarctic continents, and long-term studies are required to gather data on their population demography, genetics and other ecological parameters. Under the 'Biology and Environmental Sciences' component of the Indian Antarctic programme, long-term monitoring of Antarctic biodiversity is being conducted. In this paper, we describe results of cross-species screening of a panel of 12 and 10 microsatellite markers in two relatively little studied seabird species in Antarctica, the snow petrel Pagodroma nivea and the Wilson's storm petrel Oceanites oceanicus, respectively. These loci showed high amplification success and moderate levels of polymorphism in snow petrel (mean no. of alleles 7.08 ± 3.01 and mean observed heterozygosity 0.35 ± 0.23), but low polymorphism in Wilson's storm petrel (mean no. of alleles 3.9 ± 1.3 and mean observed heterozygosity 0.28 ± 0.18). The results demonstrate that these panels can unambiguously identify individuals of both species (cumulative PIDsibs for snow petrel is 3.7 × 10−03 and Wilson's storm petrel is 1.9 × 10−02) from field-collected samples. This work forms a baseline for undertaking long-term genetic research of these Antarctic seabird species and provides critical insights into their population genetics. Pande et al_2018_microsatellite Genotype data generated from cross-species microsatellite markers for Snow Petrel and Wilson's Storm Petrel.
format Other/Unknown Material
genre Antarc*
Antarctic
Antarctica
Snow Petrel
genre_facet Antarc*
Antarctic
Antarctica
Snow Petrel
geographic Antarctic
The Antarctic
Indian
Nivea
geographic_facet Antarctic
The Antarctic
Indian
Nivea
id ftzenodo:oai:zenodo.org:4934023
institution Open Polar
language unknown
long_lat ENVELOPE(-45.479,-45.479,-60.580,-60.580)
op_collection_id ftzenodo
op_doi https://doi.org/10.5061/dryad.57027hc10.7717/peerj.5243
op_relation https://doi.org/10.7717/peerj.5243
https://zenodo.org/communities/dryad
https://doi.org/10.5061/dryad.57027hc
oai:zenodo.org:4934023
op_rights info:eu-repo/semantics/openAccess
Creative Commons Zero v1.0 Universal
https://creativecommons.org/publicdomain/zero/1.0/legalcode
publishDate 2019
publisher Zenodo
record_format openpolar
spelling ftzenodo:oai:zenodo.org:4934023 2025-01-16T19:23:06+00:00 Data from: Cross-species screening of microsatellite markers for individual identification of snow petrel Pagodroma nivea and Wilson's storm petrel Oceanites oceanicus in Antarctica Pande, Anant Rawat, Nidhi Sivakumar, Kuppusamy Sathyakumar, Sambandam Mathur, Vinod B. Mondol, Samrat 2019-07-12 https://doi.org/10.5061/dryad.57027hc unknown Zenodo https://doi.org/10.7717/peerj.5243 https://zenodo.org/communities/dryad https://doi.org/10.5061/dryad.57027hc oai:zenodo.org:4934023 info:eu-repo/semantics/openAccess Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode allele size Pagodroma nivea Oceanites oceanicus info:eu-repo/semantics/other 2019 ftzenodo https://doi.org/10.5061/dryad.57027hc10.7717/peerj.5243 2024-12-05T15:54:58Z Seabirds are important indicators of marine ecosystem health. Species within the order Procellariiformes are the most abundant seabird species group distributed from warm tropical to cold temperate regions including Antarctica. There is a paucity of information on basic biology of the pelagic seabird species nesting on the Antarctic continents, and long-term studies are required to gather data on their population demography, genetics and other ecological parameters. Under the 'Biology and Environmental Sciences' component of the Indian Antarctic programme, long-term monitoring of Antarctic biodiversity is being conducted. In this paper, we describe results of cross-species screening of a panel of 12 and 10 microsatellite markers in two relatively little studied seabird species in Antarctica, the snow petrel Pagodroma nivea and the Wilson's storm petrel Oceanites oceanicus, respectively. These loci showed high amplification success and moderate levels of polymorphism in snow petrel (mean no. of alleles 7.08 ± 3.01 and mean observed heterozygosity 0.35 ± 0.23), but low polymorphism in Wilson's storm petrel (mean no. of alleles 3.9 ± 1.3 and mean observed heterozygosity 0.28 ± 0.18). The results demonstrate that these panels can unambiguously identify individuals of both species (cumulative PIDsibs for snow petrel is 3.7 × 10−03 and Wilson's storm petrel is 1.9 × 10−02) from field-collected samples. This work forms a baseline for undertaking long-term genetic research of these Antarctic seabird species and provides critical insights into their population genetics. Pande et al_2018_microsatellite Genotype data generated from cross-species microsatellite markers for Snow Petrel and Wilson's Storm Petrel. Other/Unknown Material Antarc* Antarctic Antarctica Snow Petrel Zenodo Antarctic The Antarctic Indian Nivea ENVELOPE(-45.479,-45.479,-60.580,-60.580)
spellingShingle allele size
Pagodroma nivea
Oceanites oceanicus
Pande, Anant
Rawat, Nidhi
Sivakumar, Kuppusamy
Sathyakumar, Sambandam
Mathur, Vinod B.
Mondol, Samrat
Data from: Cross-species screening of microsatellite markers for individual identification of snow petrel Pagodroma nivea and Wilson's storm petrel Oceanites oceanicus in Antarctica
title Data from: Cross-species screening of microsatellite markers for individual identification of snow petrel Pagodroma nivea and Wilson's storm petrel Oceanites oceanicus in Antarctica
title_full Data from: Cross-species screening of microsatellite markers for individual identification of snow petrel Pagodroma nivea and Wilson's storm petrel Oceanites oceanicus in Antarctica
title_fullStr Data from: Cross-species screening of microsatellite markers for individual identification of snow petrel Pagodroma nivea and Wilson's storm petrel Oceanites oceanicus in Antarctica
title_full_unstemmed Data from: Cross-species screening of microsatellite markers for individual identification of snow petrel Pagodroma nivea and Wilson's storm petrel Oceanites oceanicus in Antarctica
title_short Data from: Cross-species screening of microsatellite markers for individual identification of snow petrel Pagodroma nivea and Wilson's storm petrel Oceanites oceanicus in Antarctica
title_sort data from: cross-species screening of microsatellite markers for individual identification of snow petrel pagodroma nivea and wilson's storm petrel oceanites oceanicus in antarctica
topic allele size
Pagodroma nivea
Oceanites oceanicus
topic_facet allele size
Pagodroma nivea
Oceanites oceanicus
url https://doi.org/10.5061/dryad.57027hc