Genetic diversity and morphological characterisation of three turbot (Scophthalmus maximus L., 1758) populations along the Bulgarian Black Sea coast

Turbot (Scophthalmus maximus L., 1758) is a valuable commercial fish species classified as endangered. The conservation and sustainability of the turbot populations require knowledge of the population's genetic structure and constant monitoring of its biodiversity. The present study was perform...

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Published in:Nature Conservation
Main Authors: Ivanova, Petya, Dzhembekova, Nina, Atanassov, Ivan, Rusanov, Krasimir, Raykov, Violin, Zlateva, Ivelina, Yankova, Maria, Raev, Yordan, Nikolov, Galin
Format: Article in Journal/Newspaper
Language:unknown
Published: Pensoft Publishers 2021
Subjects:
CR
Online Access:https://doi.org/10.3897/natureconservation.43.64195
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spelling ftzenodo:oai:zenodo.org:4717198 2024-09-15T18:33:59+00:00 Genetic diversity and morphological characterisation of three turbot (Scophthalmus maximus L., 1758) populations along the Bulgarian Black Sea coast Ivanova, Petya Dzhembekova, Nina Atanassov, Ivan Rusanov, Krasimir Raykov, Violin Zlateva, Ivelina Yankova, Maria Raev, Yordan Nikolov, Galin 2021-04-16 https://doi.org/10.3897/natureconservation.43.64195 unknown Pensoft Publishers https://doi.org/10.3897/natureconservation.43.64195.suppl1 https://zenodo.org/communities/biosyslit https://doi.org/10.3897/natureconservation.43.64195 oai:zenodo.org:4717198 info:eu-repo/semantics/openAccess Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode Nature Conservation, 43, 123-146, (2021-04-16) Animalia Chordata Actinopterygii Pleuronectiformes Scophthalmidae Scophthalmus Scophthalmus maximus Black Sea COIII CR microsatellite genotyping population structure turbot info:eu-repo/semantics/article 2021 ftzenodo https://doi.org/10.3897/natureconservation.43.6419510.3897/natureconservation.43.64195.suppl1 2024-07-26T18:41:46Z Turbot (Scophthalmus maximus L., 1758) is a valuable commercial fish species classified as endangered. The conservation and sustainability of the turbot populations require knowledge of the population's genetic structure and constant monitoring of its biodiversity. The present study was performed to evaluate the population structure of turbot along the Bulgarian Black Sea coast using seven pairs of microsatellites, two mitochondrial DNA (COIII and CR) and 23 morphological (15 morphometric and 8 meristic) markers. A total of 72 specimens at three locations were genotyped and 59 alleles were identified. The observed number of alleles of microsatellites was more than the effective number of alleles. The overall mean values of observed (Ho) and expected heterogeneity (He) were 0.638 and 0.685. A high rate of migration between turbot populations (overall mean of Nm = 17.484), with the maximum value (19.498) between Shabla and Nesebar locations, was observed. This result corresponded to the low level of genetic differentiation amongst these populations (overall mean Fst = 0.014), but there was no correlation between genetic and geographical distance. A high level of genetic diversity in the populations was also observed. The average Garza-Williamson M index value for all populations was low (0.359), suggesting a reduction in genetic variation due to a founder effect or a genetic bottleneck. Concerning mitochondrial DNA, a total number of 17 haplotypes for COIII and 41 haplotypes for CR were identified. The mitochondrial DNA control region showed patterns with high haplotype diversity and very low nucleotide diversity, indicating a significant number of closely-related haplotypes and suggesting that this population may have undergone a recent expansion. Tajima's D test and Fu's FS test suggested recent population growth. Pairwise Fst values were very low. The admixture and lack of genetic structuring found pointed to the populations analysed probably belonging to the same genetic unit. Therefore, a proper understanding ... Article in Journal/Newspaper Scophthalmus maximus Turbot Zenodo Nature Conservation 43 123 146
institution Open Polar
collection Zenodo
op_collection_id ftzenodo
language unknown
topic Animalia
Chordata
Actinopterygii
Pleuronectiformes
Scophthalmidae
Scophthalmus
Scophthalmus maximus
Black Sea
COIII
CR
microsatellite genotyping
population structure
turbot
spellingShingle Animalia
Chordata
Actinopterygii
Pleuronectiformes
Scophthalmidae
Scophthalmus
Scophthalmus maximus
Black Sea
COIII
CR
microsatellite genotyping
population structure
turbot
Ivanova, Petya
Dzhembekova, Nina
Atanassov, Ivan
Rusanov, Krasimir
Raykov, Violin
Zlateva, Ivelina
Yankova, Maria
Raev, Yordan
Nikolov, Galin
Genetic diversity and morphological characterisation of three turbot (Scophthalmus maximus L., 1758) populations along the Bulgarian Black Sea coast
topic_facet Animalia
Chordata
Actinopterygii
Pleuronectiformes
Scophthalmidae
Scophthalmus
Scophthalmus maximus
Black Sea
COIII
CR
microsatellite genotyping
population structure
turbot
description Turbot (Scophthalmus maximus L., 1758) is a valuable commercial fish species classified as endangered. The conservation and sustainability of the turbot populations require knowledge of the population's genetic structure and constant monitoring of its biodiversity. The present study was performed to evaluate the population structure of turbot along the Bulgarian Black Sea coast using seven pairs of microsatellites, two mitochondrial DNA (COIII and CR) and 23 morphological (15 morphometric and 8 meristic) markers. A total of 72 specimens at three locations were genotyped and 59 alleles were identified. The observed number of alleles of microsatellites was more than the effective number of alleles. The overall mean values of observed (Ho) and expected heterogeneity (He) were 0.638 and 0.685. A high rate of migration between turbot populations (overall mean of Nm = 17.484), with the maximum value (19.498) between Shabla and Nesebar locations, was observed. This result corresponded to the low level of genetic differentiation amongst these populations (overall mean Fst = 0.014), but there was no correlation between genetic and geographical distance. A high level of genetic diversity in the populations was also observed. The average Garza-Williamson M index value for all populations was low (0.359), suggesting a reduction in genetic variation due to a founder effect or a genetic bottleneck. Concerning mitochondrial DNA, a total number of 17 haplotypes for COIII and 41 haplotypes for CR were identified. The mitochondrial DNA control region showed patterns with high haplotype diversity and very low nucleotide diversity, indicating a significant number of closely-related haplotypes and suggesting that this population may have undergone a recent expansion. Tajima's D test and Fu's FS test suggested recent population growth. Pairwise Fst values were very low. The admixture and lack of genetic structuring found pointed to the populations analysed probably belonging to the same genetic unit. Therefore, a proper understanding ...
format Article in Journal/Newspaper
author Ivanova, Petya
Dzhembekova, Nina
Atanassov, Ivan
Rusanov, Krasimir
Raykov, Violin
Zlateva, Ivelina
Yankova, Maria
Raev, Yordan
Nikolov, Galin
author_facet Ivanova, Petya
Dzhembekova, Nina
Atanassov, Ivan
Rusanov, Krasimir
Raykov, Violin
Zlateva, Ivelina
Yankova, Maria
Raev, Yordan
Nikolov, Galin
author_sort Ivanova, Petya
title Genetic diversity and morphological characterisation of three turbot (Scophthalmus maximus L., 1758) populations along the Bulgarian Black Sea coast
title_short Genetic diversity and morphological characterisation of three turbot (Scophthalmus maximus L., 1758) populations along the Bulgarian Black Sea coast
title_full Genetic diversity and morphological characterisation of three turbot (Scophthalmus maximus L., 1758) populations along the Bulgarian Black Sea coast
title_fullStr Genetic diversity and morphological characterisation of three turbot (Scophthalmus maximus L., 1758) populations along the Bulgarian Black Sea coast
title_full_unstemmed Genetic diversity and morphological characterisation of three turbot (Scophthalmus maximus L., 1758) populations along the Bulgarian Black Sea coast
title_sort genetic diversity and morphological characterisation of three turbot (scophthalmus maximus l., 1758) populations along the bulgarian black sea coast
publisher Pensoft Publishers
publishDate 2021
url https://doi.org/10.3897/natureconservation.43.64195
genre Scophthalmus maximus
Turbot
genre_facet Scophthalmus maximus
Turbot
op_source Nature Conservation, 43, 123-146, (2021-04-16)
op_relation https://doi.org/10.3897/natureconservation.43.64195.suppl1
https://zenodo.org/communities/biosyslit
https://doi.org/10.3897/natureconservation.43.64195
oai:zenodo.org:4717198
op_rights info:eu-repo/semantics/openAccess
Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
op_doi https://doi.org/10.3897/natureconservation.43.6419510.3897/natureconservation.43.64195.suppl1
container_title Nature Conservation
container_volume 43
container_start_page 123
op_container_end_page 146
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