Figure 5 from: Espinasa L, Smith DM, Lindquist JM (2021) The Pennsylvania grotto sculpin: population genetics. Subterranean Biology 38: 47-63. https://doi.org/10.3897/subtbiol.38.60865

Figure 5 Maximum likelihood tree of the D-loop haplotypes found in cave and surface specimens. Most similar sequences obtained in GenBank through BLAST analyses are included in the tree. In agreement with the 16S rRNA data, two distinct lineages were identified; one that includes C. bairdii specimen...

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Bibliographic Details
Main Authors: Espinasa, Luis, Smith, Drake M., Lindquist, Julianna M.
Format: Other/Unknown Material
Language:unknown
Published: Zenodo 2021
Subjects:
Animalia
Chordata
Actinopterygii
Scorpaeniformes
Cottidae
Cottus
Cottus bairdii
Cottus cognatus
Cave
hybrid
Speciation
stygobite
troglobite
Online Access:https://doi.org/10.3897/subtbiol.38.60865.figure5
id ftzenodo:oai:zenodo.org:4703496
record_format openpolar
spelling ftzenodo:oai:zenodo.org:4703496 2024-09-15T18:02:58+00:00 Figure 5 from: Espinasa L, Smith DM, Lindquist JM (2021) The Pennsylvania grotto sculpin: population genetics. Subterranean Biology 38: 47-63. https://doi.org/10.3897/subtbiol.38.60865 Espinasa, Luis Smith, Drake M. Lindquist, Julianna M. 2021-04-20 https://doi.org/10.3897/subtbiol.38.60865.figure5 unknown Zenodo https://doi.org/10.3897/subtbiol.38.60865 https://zenodo.org/communities/biosyslit https://doi.org/10.3897/subtbiol.38.60865.figure5 oai:zenodo.org:4703496 info:eu-repo/semantics/openAccess Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode Animalia Chordata Actinopterygii Scorpaeniformes Cottidae Cottus Cottus bairdii Cottus cognatus Cave hybrid Speciation stygobite troglobite info:eu-repo/semantics/other 2021 ftzenodo https://doi.org/10.3897/subtbiol.38.60865.figure510.3897/subtbiol.38.60865 2024-07-26T07:06:01Z Figure 5 Maximum likelihood tree of the D-loop haplotypes found in cave and surface specimens. Most similar sequences obtained in GenBank through BLAST analyses are included in the tree. In agreement with the 16S rRNA data, two distinct lineages were identified; one that includes C. bairdii specimens and one that includes C. cognatus. Cave haplotypes within the C. bairdii clade are identified by numerals (1–8) and Cave and Antes Creek haplotypes within the C. cognatus clade are identified by letters (A–L). Notice that cave individuals are found within both lineages. Other/Unknown Material Cottus cognatus Zenodo
institution Open Polar
collection Zenodo
op_collection_id ftzenodo
language unknown
topic Animalia
Chordata
Actinopterygii
Scorpaeniformes
Cottidae
Cottus
Cottus bairdii
Cottus cognatus
Cave
hybrid
Speciation
stygobite
troglobite
spellingShingle Animalia
Chordata
Actinopterygii
Scorpaeniformes
Cottidae
Cottus
Cottus bairdii
Cottus cognatus
Cave
hybrid
Speciation
stygobite
troglobite
Espinasa, Luis
Smith, Drake M.
Lindquist, Julianna M.
Figure 5 from: Espinasa L, Smith DM, Lindquist JM (2021) The Pennsylvania grotto sculpin: population genetics. Subterranean Biology 38: 47-63. https://doi.org/10.3897/subtbiol.38.60865
topic_facet Animalia
Chordata
Actinopterygii
Scorpaeniformes
Cottidae
Cottus
Cottus bairdii
Cottus cognatus
Cave
hybrid
Speciation
stygobite
troglobite
description Figure 5 Maximum likelihood tree of the D-loop haplotypes found in cave and surface specimens. Most similar sequences obtained in GenBank through BLAST analyses are included in the tree. In agreement with the 16S rRNA data, two distinct lineages were identified; one that includes C. bairdii specimens and one that includes C. cognatus. Cave haplotypes within the C. bairdii clade are identified by numerals (1–8) and Cave and Antes Creek haplotypes within the C. cognatus clade are identified by letters (A–L). Notice that cave individuals are found within both lineages.
format Other/Unknown Material
author Espinasa, Luis
Smith, Drake M.
Lindquist, Julianna M.
author_facet Espinasa, Luis
Smith, Drake M.
Lindquist, Julianna M.
author_sort Espinasa, Luis
title Figure 5 from: Espinasa L, Smith DM, Lindquist JM (2021) The Pennsylvania grotto sculpin: population genetics. Subterranean Biology 38: 47-63. https://doi.org/10.3897/subtbiol.38.60865
title_short Figure 5 from: Espinasa L, Smith DM, Lindquist JM (2021) The Pennsylvania grotto sculpin: population genetics. Subterranean Biology 38: 47-63. https://doi.org/10.3897/subtbiol.38.60865
title_full Figure 5 from: Espinasa L, Smith DM, Lindquist JM (2021) The Pennsylvania grotto sculpin: population genetics. Subterranean Biology 38: 47-63. https://doi.org/10.3897/subtbiol.38.60865
title_fullStr Figure 5 from: Espinasa L, Smith DM, Lindquist JM (2021) The Pennsylvania grotto sculpin: population genetics. Subterranean Biology 38: 47-63. https://doi.org/10.3897/subtbiol.38.60865
title_full_unstemmed Figure 5 from: Espinasa L, Smith DM, Lindquist JM (2021) The Pennsylvania grotto sculpin: population genetics. Subterranean Biology 38: 47-63. https://doi.org/10.3897/subtbiol.38.60865
title_sort figure 5 from: espinasa l, smith dm, lindquist jm (2021) the pennsylvania grotto sculpin: population genetics. subterranean biology 38: 47-63. https://doi.org/10.3897/subtbiol.38.60865
publisher Zenodo
publishDate 2021
url https://doi.org/10.3897/subtbiol.38.60865.figure5
genre Cottus cognatus
genre_facet Cottus cognatus
op_relation https://doi.org/10.3897/subtbiol.38.60865
https://zenodo.org/communities/biosyslit
https://doi.org/10.3897/subtbiol.38.60865.figure5
oai:zenodo.org:4703496
op_rights info:eu-repo/semantics/openAccess
Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
op_doi https://doi.org/10.3897/subtbiol.38.60865.figure510.3897/subtbiol.38.60865
_version_ 1810440502188703744

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